Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_F14
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    27   0.10 
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    27   0.10 
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    27   0.10 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    25   0.72 
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.7  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   2.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.8  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 537 INTKALXPSNENLTEXEKEAKMNKFIT 617
           +NT     +N+ LTE EKE   NK++T
Sbjct: 253 LNTGRTNFTNKQLTELEKEFHFNKYLT 279


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 537 INTKALXPSNENLTEXEKEAKMNKFIT 617
           +NT     +N+ LTE EKE   NK++T
Sbjct: 42  LNTGRTNFTNKQLTELEKEFHFNKYLT 68


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 27.5 bits (58), Expect = 0.10
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 537 INTKALXPSNENLTEXEKEAKMNKFIT 617
           +NT     +N+ LTE EKE   NK++T
Sbjct: 42  LNTGRTNFTNKQLTELEKEFHFNKYLT 68


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = +2

Query: 254 AAPGPCGTHGXATPRERGTGAKKERKPTTSNRXXEKNIGS 373
           A  GP GTH    P  RG       +P   N     ++GS
Sbjct: 52  AHTGPTGTHDAGFPSPRGALGAYPFRPMHQNSYTGYHLGS 91


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +2

Query: 248 SMAAPGPCGTHGXATPRERGTGAKKERKP 334
           SM    PCGT G           +K+RKP
Sbjct: 221 SMGVSVPCGTSGNPLEWTGQVTVRKKRKP 249


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 336 VGFLSFFAPVPLSRGVAXPCVPHGP 262
           VG  SF+ P+ +   V     PHGP
Sbjct: 51  VGEGSFYLPMNMQGFVKQQTAPHGP 75


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 622  FXVINLFILASFSSSVRFSLLGXNAFVLIT 533
            F +    + + F+SS+R  L+    F LIT
Sbjct: 1079 FPIDYTLVFSKFTSSIRMLLIQGQIFGLIT 1108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,619
Number of Sequences: 336
Number of extensions: 2113
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)