BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_F14 (655 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 49 5e-07 SPBC8D2.19 |mde3||serine/threonine protein kinase Mde3|Schizosac... 29 0.59 SPBC28F2.09 |||transcription factor TFIIA complex large subunit ... 27 3.1 SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc... 26 5.5 >SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces pombe|chr 2|||Manual Length = 466 Score = 49.2 bits (112), Expect = 5e-07 Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%) Frame = +3 Query: 165 VDYSKWKDIEISDDED-ETHPNIDTPSLFRWR 257 +DYSKW +E+SDD D E HPN+D S RWR Sbjct: 3 IDYSKWDKLELSDDSDIEVHPNVDKKSFIRWR 34 >SPBC8D2.19 |mde3||serine/threonine protein kinase Mde3|Schizosaccharomyces pombe|chr 2|||Manual Length = 559 Score = 29.1 bits (62), Expect = 0.59 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Frame = +1 Query: 199 PTMKTRPIQTLIPHHCFDGGTR--PVWNAWXSDAARKRNWSKE 321 P K PIQ L+P +C +G + P AW D + KE Sbjct: 278 PPTKPYPIQKLLPQNCPEGHAKMIPCLLAWNPDVRPTAKYCKE 320 >SPBC28F2.09 |||transcription factor TFIIA complex large subunit |Schizosaccharomyces pombe|chr 2|||Manual Length = 369 Score = 26.6 bits (56), Expect = 3.1 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 Query: 186 DIEISDDEDETHPNIDTPS 242 D I D+EDE P +DTPS Sbjct: 279 DGTIEDNEDEKKPPVDTPS 297 >SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc25|Schizosaccharomyces pombe|chr 1|||Manual Length = 596 Score = 25.8 bits (54), Expect = 5.5 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +3 Query: 504 TISEPGFNKTVINTKALXPSNENLTE 581 T+ P NKT+++ PSN+ LTE Sbjct: 101 TVETPLANKTIVSPLPESPSNDALTE 126 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,090,191 Number of Sequences: 5004 Number of extensions: 34760 Number of successful extensions: 99 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 98 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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