BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_F12 (648 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9BZS6 Cluster: SSU72 RNA polymerase II CTD phosphatase... 219 5e-56 UniRef50_Q22453 Cluster: Putative uncharacterized protein; n=2; ... 192 5e-48 UniRef50_UPI00005A3F7F Cluster: PREDICTED: similar to Ssu72 RNA ... 171 9e-42 UniRef50_Q4RXN5 Cluster: Chromosome 11 SCAF14979, whole genome s... 170 3e-41 UniRef50_UPI0000F31DDA Cluster: UPI0000F31DDA related cluster; n... 169 7e-41 UniRef50_O42868 Cluster: RNA polymerase II subunit A C-terminal ... 168 1e-40 UniRef50_P53538 Cluster: RNA polymerase II subunit A C-terminal ... 160 3e-38 UniRef50_Q2QX64 Cluster: Ssu72-like protein, expressed; n=3; Ory... 142 5e-33 UniRef50_Q8SRQ6 Cluster: SSU72 PROTEIN HOMOLOG; n=1; Encephalito... 140 4e-32 UniRef50_Q558Z3 Cluster: Putative uncharacterized protein; n=1; ... 138 8e-32 UniRef50_Q6BYP7 Cluster: RNA polymerase II subunit A C-terminal ... 135 8e-31 UniRef50_Q4WHY5 Cluster: RNA polymerase II subunit A C-terminal ... 125 1e-27 UniRef50_Q00U02 Cluster: Protein involved in transcription start... 118 2e-25 UniRef50_UPI00004982BE Cluster: conserved hypothetical protein; ... 114 2e-24 UniRef50_Q5SV18 Cluster: SSU72 RNA polymerase II CTD phosphatase... 104 2e-21 UniRef50_Q9H933 Cluster: CDNA FLJ13048 fis, clone NT2RP3001399, ... 104 2e-21 UniRef50_A2FVC5 Cluster: SSU72 protein-related protein; n=1; Tri... 100 6e-20 UniRef50_UPI0000F20D86 Cluster: PREDICTED: hypothetical protein;... 99 1e-19 UniRef50_A5GAI1 Cluster: Putative uncharacterized protein precur... 36 1.1 UniRef50_Q93GC2 Cluster: GlyA; n=1; Xanthomonas campestris|Rep: ... 34 2.6 UniRef50_Q6W1J7 Cluster: Transcriptional regulatory protein; n=1... 33 4.5 UniRef50_A7AZY7 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5 >UniRef50_Q9BZS6 Cluster: SSU72 RNA polymerase II CTD phosphatase homolog; n=70; Eukaryota|Rep: SSU72 RNA polymerase II CTD phosphatase homolog - Homo sapiens (Human) Length = 194 Score = 219 bits (535), Expect = 5e-56 Identities = 99/155 (63%), Positives = 120/155 (77%) Frame = +3 Query: 180 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 359 S L VAVVCSSN NRSMEAH L K+GF+V+S+GTG VKLPG + D+PN Y+F YD+ Sbjct: 4 SPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQ 63 Query: 360 IYNDLMEKDKNYYTQNGLLHMLDRNRXIKPCPEKFQVCNERFDVIITCEXRXYDQVIEWF 539 +YNDL+ KDK YTQNG+LHMLDRN+ IKP PE+FQ C + FD+I+TCE R YDQV+E Sbjct: 64 MYNDLLRKDKELYTQNGILHMLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDL 123 Query: 540 GSXRSIYNQPVHVVNIDIQXNHEEATIGAFLISDM 644 S QPVHVVN+DIQ NHEEAT+GAFLI ++ Sbjct: 124 NSREQETCQPVHVVNVDIQDNHEEATLGAFLICEL 158 >UniRef50_Q22453 Cluster: Putative uncharacterized protein; n=2; Caenorhabditis elegans|Rep: Putative uncharacterized protein - Caenorhabditis elegans Length = 235 Score = 192 bits (469), Expect = 5e-48 Identities = 86/156 (55%), Positives = 112/156 (71%), Gaps = 1/156 (0%) Frame = +3 Query: 180 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFG-VLYD 356 S L AV CSSNMNRSMEAH L K+GFN++SYG+G +VK+PG + D+PNCYEFG Y+ Sbjct: 43 SKLRFAVSCSSNMNRSMEAHGILKKRGFNIESYGSGNQVKMPGPTVDKPNCYEFGPTTYE 102 Query: 357 EIYNDLMEKDKNYYTQNGLLHMLDRNRXIKPCPEKFQVCNERFDVIITCEXRXYDQVIEW 536 +IY DL KD + YTQNGLLHM+DRNR IK P++FQ FD+++ E R +DQV+++ Sbjct: 103 DIYADLTNKDLHLYTQNGLLHMVDRNRRIKSRPQRFQAETREFDIVLCLEERVFDQVVDF 162 Query: 537 FGSXRSIYNQPVHVVNIDIQXNHEEATIGAFLISDM 644 PVHV+NIDI+ N EEAT GAF ++D+ Sbjct: 163 LNRSVGKSGNPVHVINIDIEDNAEEATFGAFFVADL 198 >UniRef50_UPI00005A3F7F Cluster: PREDICTED: similar to Ssu72 RNA polymerase II CTD phosphatase homolog; n=3; Laurasiatheria|Rep: PREDICTED: similar to Ssu72 RNA polymerase II CTD phosphatase homolog - Canis familiaris Length = 246 Score = 171 bits (417), Expect = 9e-42 Identities = 81/152 (53%), Positives = 105/152 (69%) Frame = +3 Query: 180 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 359 S L VAVVCSSNMNRSMEAH L K+GF V+S+G +VKLPG + P Y+F Y + Sbjct: 29 SPLRVAVVCSSNMNRSMEAHDILQKRGFCVRSFGVARQVKLPGLIRNCPVLYDFSTTYKQ 88 Query: 360 IYNDLMEKDKNYYTQNGLLHMLDRNRXIKPCPEKFQVCNERFDVIITCEXRXYDQVIEWF 539 +Y DL K++ Y+ NG+L +L RN+ IKP PE+FQ C++ FDVI TCE R YD+V++ Sbjct: 89 MYKDLWRKNRECYSSNGILQLLGRNQRIKPHPERFQECSDPFDVIFTCEERVYDRVVQDL 148 Query: 540 GSXRSIYNQPVHVVNIDIQXNHEEATIGAFLI 635 + QP+HVVN+DI EEAT+GAFLI Sbjct: 149 CAREQATFQPLHVVNVDIVDTLEEATLGAFLI 180 >UniRef50_Q4RXN5 Cluster: Chromosome 11 SCAF14979, whole genome shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 11 SCAF14979, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 231 Score = 170 bits (413), Expect = 3e-41 Identities = 74/116 (63%), Positives = 92/116 (79%) Frame = +3 Query: 186 LYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIY 365 L VAVVCSSN NRSMEAH L K+GF+V+S+GTG VKLPG + D+PN Y+F Y ++Y Sbjct: 6 LRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGTHVKLPGPTPDKPNVYDFKTTYVQMY 65 Query: 366 NDLMEKDKNYYTQNGLLHMLDRNRXIKPCPEKFQVCNERFDVIITCEXRXYDQVIE 533 NDL+ KDK YTQNG+LHMLDRN+ IK PE+FQ C +RFD+++TCE R YDQV+E Sbjct: 66 NDLVRKDKELYTQNGILHMLDRNKRIKSKPERFQNCKDRFDLVVTCEERVYDQVVE 121 Score = 50.8 bits (116), Expect = 3e-05 Identities = 20/27 (74%), Positives = 25/27 (92%) Frame = +3 Query: 564 QPVHVVNIDIQXNHEEATIGAFLISDM 644 QPVHV+N+DIQ NHEEAT+GAFLI ++ Sbjct: 169 QPVHVINVDIQDNHEEATLGAFLICEL 195 >UniRef50_UPI0000F31DDA Cluster: UPI0000F31DDA related cluster; n=1; Bos taurus|Rep: UPI0000F31DDA UniRef100 entry - Bos Taurus Length = 218 Score = 169 bits (410), Expect = 7e-41 Identities = 75/151 (49%), Positives = 102/151 (67%) Frame = +3 Query: 192 VAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYND 371 VAVVC SNMNRSMEAH L +KGF V+S+G G +V+LPG + + P Y F Y+E+ D Sbjct: 11 VAVVCMSNMNRSMEAHRILRRKGFRVRSFGAGSRVRLPGRARNLPVVYNFSTTYEEMRKD 70 Query: 372 LMEKDKNYYTQNGLLHMLDRNRXIKPCPEKFQVCNERFDVIITCEXRXYDQVIEWFGSXR 551 L+ KD+ Y NG+LH+L RN IKP PE+FQ C + FDVI TC Y++V+E Sbjct: 71 LVRKDRQRYNSNGILHILGRNERIKPRPERFQECRDHFDVIFTCAESVYNKVVEELWVRE 130 Query: 552 SIYNQPVHVVNIDIQXNHEEATIGAFLISDM 644 QPVHV+N+D+ N E+AT+G+F+I ++ Sbjct: 131 QETFQPVHVINVDMADNLEDATLGSFIICEL 161 >UniRef50_O42868 Cluster: RNA polymerase II subunit A C-terminal domain phosphatase ssu72; n=7; Fungi/Metazoa group|Rep: RNA polymerase II subunit A C-terminal domain phosphatase ssu72 - Schizosaccharomyces pombe (Fission yeast) Length = 197 Score = 168 bits (408), Expect = 1e-40 Identities = 76/156 (48%), Positives = 106/156 (67%) Frame = +3 Query: 180 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 359 ++L ++V+C+SN NRSMEAH L G+ V S+GTG V+LPG S D+PN Y+FG YDE Sbjct: 5 TNLQISVICASNQNRSMEAHNVLKNAGYQVDSFGTGSAVRLPGPSIDKPNIYQFGYPYDE 64 Query: 360 IYNDLMEKDKNYYTQNGLLHMLDRNRXIKPCPEKFQVCNERFDVIITCEXRXYDQVIEWF 539 IY +L +D YT NGLL MLDRNR IK P ++Q + ++++ITCE R YD + E Sbjct: 65 IYKELEAQDSRLYTANGLLKMLDRNRRIKRAPCRWQDQDSIYNIVITCEERCYDAICEDL 124 Query: 540 GSXRSIYNQPVHVVNIDIQXNHEEATIGAFLISDMV 647 N+PV+++N+DI+ NHEEA++G I D+V Sbjct: 125 YRRGETLNRPVYLINVDIKDNHEEASVGGKAILDLV 160 >UniRef50_P53538 Cluster: RNA polymerase II subunit A C-terminal domain phosphatase SSU72; n=7; Saccharomycetales|Rep: RNA polymerase II subunit A C-terminal domain phosphatase SSU72 - Saccharomyces cerevisiae (Baker's yeast) Length = 206 Score = 160 bits (388), Expect = 3e-38 Identities = 75/155 (48%), Positives = 101/155 (65%) Frame = +3 Query: 180 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 359 S+L VC+SN NRSME+H L + G+NV SYGTG V+LPG S D+PN Y FG Y++ Sbjct: 7 SNLKFCTVCASNNNRSMESHKVLQEAGYNVSSYGTGSAVRLPGLSIDKPNVYSFGTPYND 66 Query: 360 IYNDLMEKDKNYYTQNGLLHMLDRNRXIKPCPEKFQVCNERFDVIITCEXRXYDQVIEWF 539 IYNDL+ + + Y NGLL MLDRNR +K PEK+Q + FD + TCE R +D V E Sbjct: 67 IYNDLLSQSADRYKSNGLLQMLDRNRRLKKAPEKWQESTKVFDFVFTCEERCFDAVCEDL 126 Query: 540 GSXRSIYNQPVHVVNIDIQXNHEEATIGAFLISDM 644 + N+ VHV+N+DI+ + E A IG+ I ++ Sbjct: 127 MNRGGKLNKIVHVINVDIKDDDENAKIGSKAILEL 161 >UniRef50_Q2QX64 Cluster: Ssu72-like protein, expressed; n=3; Oryza sativa|Rep: Ssu72-like protein, expressed - Oryza sativa subsp. japonica (Rice) Length = 200 Score = 142 bits (345), Expect = 5e-33 Identities = 70/152 (46%), Positives = 98/152 (64%), Gaps = 2/152 (1%) Frame = +3 Query: 195 AVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDL 374 A+VCSSNMNRSMEAH+ L + G +V SYGTG VKLPG S PN Y+FG Y+ IY+DL Sbjct: 12 AMVCSSNMNRSMEAHSLLGRAGLDVASYGTGTHVKLPGPSLHEPNVYDFGTPYNVIYDDL 71 Query: 375 MEKDKNYYTQNGLLHMLDRNRXIKPCPEKFQ--VCNERFDVIITCEXRXYDQVIEWFGSX 548 KD + Y +NGLL ML RN +K P+++Q + FDVI + E R +D +++ + Sbjct: 72 RRKDPDLYKRNGLLPMLKRNTSVKLAPQRWQDNAGDGLFDVIFSFEERVFDLIVDDMHNR 131 Query: 549 RSIYNQPVHVVNIDIQXNHEEATIGAFLISDM 644 + ++N+D++ NHEEA +GA L D+ Sbjct: 132 EQRMLKNALIINMDVKDNHEEAGVGAKLALDL 163 >UniRef50_Q8SRQ6 Cluster: SSU72 PROTEIN HOMOLOG; n=1; Encephalitozoon cuniculi|Rep: SSU72 PROTEIN HOMOLOG - Encephalitozoon cuniculi Length = 193 Score = 140 bits (338), Expect = 4e-32 Identities = 65/152 (42%), Positives = 96/152 (63%) Frame = +3 Query: 192 VAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYND 371 +AV C+ N NRSM+ H L KKG VKS+GT +KLPG + D+PN Y FGV Y +IY+D Sbjct: 6 LAVTCAMNQNRSMQTHDLLAKKGIPVKSFGTNPVIKLPGETMDKPNVYNFGVTYQQIYDD 65 Query: 372 LMEKDKNYYTQNGLLHMLDRNRXIKPCPEKFQVCNERFDVIITCEXRXYDQVIEWFGSXR 551 L K++++Y ++G+L++L+RN +K PE F +E FD++ITCE R + + E++ Sbjct: 66 LCMKNEDHYRESGILYLLERNMGVKERPENFFQRSEDFDLVITCEERVFTSIFEYYADAP 125 Query: 552 SIYNQPVHVVNIDIQXNHEEATIGAFLISDMV 647 S Q +VN DI+ +A GA I + V Sbjct: 126 SC-TQCFFMVNFDIRDTPSDAIAGAQEILEFV 156 >UniRef50_Q558Z3 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 214 Score = 138 bits (335), Expect = 8e-32 Identities = 68/149 (45%), Positives = 95/149 (63%), Gaps = 4/149 (2%) Frame = +3 Query: 192 VAVVCSSNMNRSMEAHAFLVKKGF-NVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYN 368 +A+VC+SN NRS+EAH VK GF N++S+GT KLPG S +PN + FG Y EIY Sbjct: 24 IAMVCASNQNRSLEAHHLFVKNGFKNIRSFGTSAHCKLPGPSIHQPNIFSFGTPYQEIYT 83 Query: 369 DLMEKDKNYYTQNGLLHMLDRNRXIKPCPEKFQVCNE-RFDVIITCEXRXYDQVIEWF-- 539 L +D+ Y +NGLL+ML+RN +K PEK+Q + +F+++ T + R YD VIE Sbjct: 84 SLKNQDQELYIRNGLLNMLERNISVKLAPEKWQEEQQSKFEIVYTFDQRVYDAVIEDLLQ 143 Query: 540 GSXRSIYNQPVHVVNIDIQXNHEEATIGA 626 S QPVH++N+ ++ HEEA GA Sbjct: 144 RDVSSSLLQPVHIINLQVKDTHEEAVGGA 172 >UniRef50_Q6BYP7 Cluster: RNA polymerase II subunit A C-terminal domain phosphatase SSU72; n=4; Saccharomycetales|Rep: RNA polymerase II subunit A C-terminal domain phosphatase SSU72 - Debaryomyces hansenii (Yeast) (Torulaspora hansenii) Length = 223 Score = 135 bits (327), Expect = 8e-31 Identities = 68/156 (43%), Positives = 96/156 (61%), Gaps = 10/156 (6%) Frame = +3 Query: 186 LYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIY 365 L + VC++N NRSME+H L G+NV+S+GTG V+LPG D+PN YEFG YD+IY Sbjct: 6 LKICTVCAANNNRSMESHKQLKDAGYNVRSFGTGSAVRLPGPLVDKPNVYEFGTPYDDIY 65 Query: 366 NDLMEKD-KNYYTQNGLLHMLDRNRXIKPCPEKF--QVCNERFDVIITCEXRXYDQVIEW 536 DL ++ Y NGL+ M++RNR IK PEK+ +FD++ITCE R +D V++ Sbjct: 66 RDLTSQEYHKMYESNGLIRMINRNRHIKRAPEKWHNNASAGKFDLVITCEERCFDLVLDD 125 Query: 537 F-------GSXRSIYNQPVHVVNIDIQXNHEEATIG 623 + Q VH++NIDI+ ++E A IG Sbjct: 126 LMVRLVNKDQADTEIKQAVHIINIDIKDDYENAVIG 161 >UniRef50_Q4WHY5 Cluster: RNA polymerase II subunit A C-terminal domain phosphatase ssu72; n=16; Pezizomycotina|Rep: RNA polymerase II subunit A C-terminal domain phosphatase ssu72 - Aspergillus fumigatus (Sartorya fumigata) Length = 287 Score = 125 bits (301), Expect = 1e-27 Identities = 74/177 (41%), Positives = 98/177 (55%), Gaps = 24/177 (13%) Frame = +3 Query: 186 LYVAVVCSSNMNRSMEAHAFL--VKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVL-YD 356 L VC+SN NRSMEAH L F V S+GTG V+LPG S +PN Y F Y Sbjct: 53 LKFCTVCASNQNRSMEAHLRLSTAPSPFPVISFGTGSLVRLPGPSITQPNVYNFNTTSYS 112 Query: 357 EIYNDLMEKDKNYYTQNGLLHMLDRNRXIKPCPEKFQ---------------------VC 473 ++Y++L+ KD+ Y NGLL+MLDRNR +K PE+FQ Sbjct: 113 QMYDELLAKDERLYRNNGLLNMLDRNRNLKWGPERFQDWVPGMPRVDHVSKGDKGALGTE 172 Query: 474 NERFDVIITCEXRXYDQVIEWFGSXRSIYNQPVHVVNIDIQXNHEEATIGAFLISDM 644 DVIITCE R +D V++ + + N+PVHV N+DI+ NHEEA +G I ++ Sbjct: 173 GGTVDVIITCEERCWDAVVDDLMNKGAALNRPVHVFNVDIRDNHEEALVGGKAILEL 229 >UniRef50_Q00U02 Cluster: Protein involved in transcription start site selection; n=2; Ostreococcus|Rep: Protein involved in transcription start site selection - Ostreococcus tauri Length = 205 Score = 118 bits (283), Expect = 2e-25 Identities = 65/155 (41%), Positives = 93/155 (60%), Gaps = 7/155 (4%) Frame = +3 Query: 165 SNFKMSDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEF- 341 S+ S A VC++N NRSMEAH L++ GF+VKSYG +VKLPGAS D PN Y+F Sbjct: 3 SSTSRSGYRYACVCAANFNRSMEAHRVLLENGFDVKSYGAASRVKLPGASRDDPNVYDFD 62 Query: 342 GVLYDEIYNDLMEKDKNY---YTQNGLLHMLDRNRXIKPCPEKFQVCNER---FDVIITC 503 G Y+EI DL + ++ Y + G+ ML RN IK CPE+++ ER FDVI+ Sbjct: 63 GTSYEEILRDLRSQSEDLVKNYEERGMFDMLVRNAKIKRCPERWKTHRERGETFDVIVCF 122 Query: 504 EXRXYDQVIEWFGSXRSIYNQPVHVVNIDIQXNHE 608 E R +D V+ + + + VVN+D++ ++E Sbjct: 123 EERVFDLVVMDLRAAGGARDAAL-VVNLDVRDSYE 156 >UniRef50_UPI00004982BE Cluster: conserved hypothetical protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved hypothetical protein - Entamoeba histolytica HM-1:IMSS Length = 201 Score = 114 bits (275), Expect = 2e-24 Identities = 59/154 (38%), Positives = 90/154 (58%), Gaps = 2/154 (1%) Frame = +3 Query: 192 VAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYND 371 +AV+C SN NRS+ AH L + G+NV S+GTG LPGA+ R ++FG+ Y +I N Sbjct: 15 IAVICRSNQNRSISAHCRLKQLGYNVSSFGTGVYTILPGAT--RNFGFQFGIPYKDIKNS 72 Query: 372 LMEKDKN--YYTQNGLLHMLDRNRXIKPCPEKFQVCNERFDVIITCEXRXYDQVIEWFGS 545 L + + + YY +N + MLDRN +K PEKFQ C + F++IIT + + V+E+F S Sbjct: 73 LPKDEASVEYYRKNKIYQMLDRNANLKSAPEKFQDCKKEFNIIITLDYSVFMDVLEYFDS 132 Query: 546 XRSIYNQPVHVVNIDIQXNHEEATIGAFLISDMV 647 S +V N+ + + A GA +S+ + Sbjct: 133 RESSTGSLCYVFNLTVMDQLDTAEKGAIEVSEFL 166 >UniRef50_Q5SV18 Cluster: SSU72 RNA polymerase II CTD phosphatase homolog; n=9; Euteleostomi|Rep: SSU72 RNA polymerase II CTD phosphatase homolog - Homo sapiens (Human) Length = 111 Score = 104 bits (250), Expect = 2e-21 Identities = 47/75 (62%), Positives = 57/75 (76%) Frame = +3 Query: 420 MLDRNRXIKPCPEKFQVCNERFDVIITCEXRXYDQVIEWFGSXRSIYNQPVHVVNIDIQX 599 MLDRN+ IKP PE+FQ C + FD+I+TCE R YDQV+E S QPVHVVN+DIQ Sbjct: 1 MLDRNKRIKPRPERFQNCKDLFDLILTCEERVYDQVVEDLNSREQETCQPVHVVNVDIQD 60 Query: 600 NHEEATIGAFLISDM 644 NHEEAT+GAFLI ++ Sbjct: 61 NHEEATLGAFLICEL 75 >UniRef50_Q9H933 Cluster: CDNA FLJ13048 fis, clone NT2RP3001399, weakly similar to SSU72 PROTEIN (Ssu72 RNA polymerase II CTD phosphatase homolog (Yeast), isoform CRA_a); n=1; Homo sapiens|Rep: CDNA FLJ13048 fis, clone NT2RP3001399, weakly similar to SSU72 PROTEIN (Ssu72 RNA polymerase II CTD phosphatase homolog (Yeast), isoform CRA_a) - Homo sapiens (Human) Length = 153 Score = 104 bits (249), Expect = 2e-21 Identities = 46/73 (63%), Positives = 56/73 (76%) Frame = +3 Query: 180 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 359 S L VAVVCSSN NRSMEAH L K+GF+V+S+GTG VKLPG + D+PN Y+F YD+ Sbjct: 4 SPLRVAVVCSSNQNRSMEAHNILSKRGFSVRSFGTGTHVKLPGPAPDKPNVYDFKTTYDQ 63 Query: 360 IYNDLMEKDKNYY 398 +YNDL+ KDK Y Sbjct: 64 MYNDLLRKDKELY 76 >UniRef50_A2FVC5 Cluster: SSU72 protein-related protein; n=1; Trichomonas vaginalis G3|Rep: SSU72 protein-related protein - Trichomonas vaginalis G3 Length = 204 Score = 99.5 bits (237), Expect = 6e-20 Identities = 57/152 (37%), Positives = 83/152 (54%), Gaps = 5/152 (3%) Frame = +3 Query: 180 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 359 + L A VC+SN+NRSME H L + GFNV SYGT + VK+PGAS + P ++FG Y E Sbjct: 5 NQLAFACVCASNVNRSMEGHRVLKEAGFNVSSYGTNDYVKMPGAS-NVPLQFDFGATYKE 63 Query: 360 IYNDLMEKDKNYYTQNGLLHMLDRNRXIKPCPEKFQ-----VCNERFDVIITCEXRXYDQ 524 I + + ++ YY + GL+ ML + K PE++ + FDVI T + D+ Sbjct: 64 ILSKMESENNQYYEEQGLIKMLRDDANTKEKPERWSSTFNPATLKYFDVIFTYDNNVMDR 123 Query: 525 VIEWFGSXRSIYNQPVHVVNIDIQXNHEEATI 620 V+ F + Q HVVNI + + A + Sbjct: 124 VLNEFRENGNRTFQISHVVNIQTPDSRDNAIL 155 >UniRef50_UPI0000F20D86 Cluster: PREDICTED: hypothetical protein; n=1; Danio rerio|Rep: PREDICTED: hypothetical protein - Danio rerio Length = 228 Score = 98.7 bits (235), Expect = 1e-19 Identities = 43/68 (63%), Positives = 54/68 (79%) Frame = +3 Query: 186 LYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIY 365 L VAVVCSSN NRSMEAH L K+GF+V+S+GTG VKLPG + D+PN Y+F Y+++Y Sbjct: 6 LRVAVVCSSNQNRSMEAHNILSKRGFDVRSFGTGTHVKLPGPAPDKPNIYDFKTTYEQMY 65 Query: 366 NDLMEKDK 389 NDL+ KDK Sbjct: 66 NDLVRKDK 73 >UniRef50_A5GAI1 Cluster: Putative uncharacterized protein precursor; n=1; Geobacter uraniumreducens Rf4|Rep: Putative uncharacterized protein precursor - Geobacter uraniumreducens Rf4 Length = 195 Score = 35.5 bits (78), Expect = 1.1 Identities = 29/95 (30%), Positives = 40/95 (42%) Frame = +3 Query: 180 SDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDE 359 SD AV SS S + L+ + SYG G + L GA A P F L+D Sbjct: 85 SDTNGAVSSSSGPIVSGISEEVLLSSANFIGSYGNGSHIDLSGAVASMPGNDFFDGLFDG 144 Query: 360 IYNDLMEKDKNYYTQNGLLHMLDRNRXIKPCPEKF 464 +++D + D +G H D N + P P F Sbjct: 145 LFDDFFDNDHGPGNNDGGGH--DNNAPV-PEPASF 176 >UniRef50_Q93GC2 Cluster: GlyA; n=1; Xanthomonas campestris|Rep: GlyA - Xanthomonas campestris Length = 374 Score = 34.3 bits (75), Expect = 2.6 Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 1/90 (1%) Frame = +3 Query: 252 KKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYYTQNGLLHMLDR 431 + GF VK Y TGE ++PGA P FG E +L K+ L H Sbjct: 157 RPGFVVKDYDTGECWRVPGACPGYPENSTFGC--GESVAELQATRKSQIDPRRLFHNQQE 214 Query: 432 NRXIKPCPEKFQVCN-ERFDVIITCEXRXY 518 K C + Q+ N + D++I R Y Sbjct: 215 CIARKSCELRCQMDNCQWMDLVIPAFTRPY 244 >UniRef50_Q6W1J7 Cluster: Transcriptional regulatory protein; n=1; Rhizobium sp. NGR234|Rep: Transcriptional regulatory protein - Rhizobium sp. (strain NGR234) Length = 366 Score = 33.5 bits (73), Expect = 4.5 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = +3 Query: 168 NFKMSDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGV 347 N K+S+ +VA +CS N+ + A +K+G +Y G+K L AS DR Y G+ Sbjct: 175 NNKLSNEWVASICSDNVEGGRQIAALFLKRGARRFAYIGGKKGNL--ASEDRFAGYLSGL 232 Query: 348 LYDEI 362 + + I Sbjct: 233 MQNGI 237 >UniRef50_A7AZY7 Cluster: Putative uncharacterized protein; n=1; Ruminococcus gnavus ATCC 29149|Rep: Putative uncharacterized protein - Ruminococcus gnavus ATCC 29149 Length = 305 Score = 33.5 bits (73), Expect = 4.5 Identities = 19/62 (30%), Positives = 33/62 (53%) Frame = +3 Query: 333 YEFGVLYDEIYNDLMEKDKNYYTQNGLLHMLDRNRXIKPCPEKFQVCNERFDVIITCEXR 512 YEF V + Y D+++ KN+ ++ G+L++ + NR K + F CN F ++ C Sbjct: 118 YEFAVHETKTY-DVIQDVKNFKSEIGILYVNEFNR--KVLTKLFHECNLEFHELLKCSIY 174 Query: 513 XY 518 Y Sbjct: 175 VY 176 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 536,292,400 Number of Sequences: 1657284 Number of extensions: 9250846 Number of successful extensions: 19487 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 18937 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19466 length of database: 575,637,011 effective HSP length: 97 effective length of database: 414,880,463 effective search space used: 48955894634 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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