Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_F12
         (648 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2027| Best HMM Match : No HMM Matches (HMM E-Value=.)               93   2e-19
SB_641| Best HMM Match : No HMM Matches (HMM E-Value=.)                32   0.35 
SB_38544| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_55929| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.3  

>SB_2027| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 111

 Score = 92.7 bits (220), Expect = 2e-19
 Identities = 46/75 (61%), Positives = 53/75 (70%)
 Frame = +3

Query: 420 MLDRNRXIKPCPEKFQVCNERFDVIITCEXRXYDQVIEWFGSXRSIYNQPVHVVNIDIQX 599
           MLDRNR IK  PE+FQ   E FD+IIT E R YDQVIE      +   +PVHVVNIDI  
Sbjct: 1   MLDRNRRIKALPERFQEAVEHFDLIITAEERVYDQVIEHLEGLDAQSYKPVHVVNIDILD 60

Query: 600 NHEEATIGAFLISDM 644
           NHEEAT+GAFLI ++
Sbjct: 61  NHEEATLGAFLICEI 75


>SB_641| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 530

 Score = 32.3 bits (70), Expect = 0.35
 Identities = 20/58 (34%), Positives = 25/58 (43%)
 Frame = +3

Query: 237 HAFLVKKGFNVKSYGTGEKVKLPGASADRPNCYEFGVLYDEIYNDLMEKDKNYYTQNG 410
           HAF      NVK+ G   K  +   S  RP C+  G     IY  ++E  KN    NG
Sbjct: 421 HAFTSTSTRNVKTPGLKTKTDISSQSFSRPVCFATGDCSAMIYYQVIEWMKNPQDVNG 478


>SB_38544| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 935

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = +3

Query: 384 DKNYYTQNGLLHMLDRNRXI--KPCPEKF 464
           DKN+Y ++GLL  L  +R I  K C EKF
Sbjct: 656 DKNFYCEDGLLMTLANHRQIAQKDCSEKF 684


>SB_55929| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 931

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -1

Query: 510 FXHKLL*HQIFHYTPEIFLDKALXFYSCLTYVTVHF 403
           + H+ + H+  H+TPE +L+ A+     LT+V V F
Sbjct: 782 YIHQEVYHRSQHFTPESYLEAAMRADRKLTFVPVIF 817


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,831,054
Number of Sequences: 59808
Number of extensions: 293523
Number of successful extensions: 656
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)