BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_F12 (648 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 1.9 AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 5.9 AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 5.9 >DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine receptor alpha9subunit protein. Length = 431 Score = 23.4 bits (48), Expect = 1.9 Identities = 13/49 (26%), Positives = 22/49 (44%) Frame = +3 Query: 147 KCSVX*SNFKMSDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEK 293 KC+ S++ + S ++ E + FL KKGF++ Y K Sbjct: 168 KCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHMDGYTNNSK 216 >AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor protein. Length = 587 Score = 21.8 bits (44), Expect = 5.9 Identities = 14/59 (23%), Positives = 24/59 (40%) Frame = +3 Query: 396 YTQNGLLHMLDRNRXIKPCPEKFQVCNERFDVIITCEXRXYDQVIEWFGSXRSIYNQPV 572 + QNG + +KPCP ++ N+ V+ + Y ++ IYN V Sbjct: 217 FAQNGPFNTTTIFVPVKPCPWICELTNDAGYVVYSALGSFYIPMLVMLFFYWRIYNAAV 275 >AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation factor 2 protein. Length = 690 Score = 21.8 bits (44), Expect = 5.9 Identities = 9/44 (20%), Positives = 24/44 (54%) Frame = +3 Query: 165 SNFKMSDLYVAVVCSSNMNRSMEAHAFLVKKGFNVKSYGTGEKV 296 S+ ++++ + A++ N+N + + KKG +++ Y K+ Sbjct: 522 SDIELANTFKAIIYGFNVNATKQIKDEANKKGVSLRFYNVVYKL 565 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 157,454 Number of Sequences: 438 Number of extensions: 2946 Number of successful extensions: 6 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19560480 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -