Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_F10
(652 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 30 1.5
At5g65010.1 68418.m08177 asparagine synthetase 2 (ASN2) identica... 29 2.7
At4g03300.1 68417.m00451 Ulp1 protease family protein contains P... 29 3.5
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to... 28 4.7
At2g14770.1 68415.m01668 Ulp1 protease family protein similar to... 28 4.7
At1g34740.1 68414.m04319 Ulp1 protease family protein contains P... 28 4.7
At5g65010.2 68418.m08178 asparagine synthetase 2 (ASN2) identica... 28 6.2
At5g10240.1 68418.m01189 asparagine synthetase 3 (ASN3) identica... 28 6.2
At4g21670.1 68417.m03139 double-stranded RNA-binding domain (DsR... 28 6.2
At2g13540.1 68415.m01493 mRNA cap-binding protein (ABH1) identic... 28 6.2
At1g65040.1 68414.m07373 zinc finger (C3HC4-type RING finger) fa... 28 6.2
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 88 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRID 219
SES N K + +T D K ILM+ D++A+++ S+ D
Sbjct: 1254 SESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQAD 1297
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 88 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRID 219
SES N K + +T D K ILM+ D++A+++ S+ D
Sbjct: 1365 SESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQAD 1408
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 88 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSRID 219
SES N K + +T D K ILM+ D++A+ + S+ D
Sbjct: 1476 SESKEAENQQKSQATTQGESDESKNEILMQADSQADTHANSQGD 1519
>At5g65010.1 68418.m08177 asparagine synthetase 2 (ASN2) identical
to asparagine synthetase (ASN2) [Arabidopsis thaliana]
GI:3859536
Length = 578
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 588 ANWYIFXSLLNNRXIKFEQFTPLSFAVYVTR*VSNKMFPVIALR 457
AN ++ ++L+N F TPL+ Y R + K FP A R
Sbjct: 469 ANKHVSDTMLSNASFVFPDNTPLTKEAYYYRTIFEKFFPKSAAR 512
>At4g03300.1 68417.m00451 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790 , At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At1g25886
Length = 1285
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/53 (24%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +1
Query: 88 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDNEANANRKSR-IDLNALPTRQ 243
S+++ + +E++++ K+P VKK ++ E+D+ + K++ + + +PT+Q
Sbjct: 950 SDNAAAVEAKEEKKASPKVPKKVKKQLIYEQDDAHPHDFKAKTVLVPDVPTQQ 1002
>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1158
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/33 (30%), Positives = 23/33 (69%)
Frame = +1
Query: 88 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDN 186
S+++ + +E++S+ K+P VKK ++ E+D+
Sbjct: 858 SDNAAAVEAEEEKKSSPKVPKKVKKQLVYEQDD 890
>At2g14770.1 68415.m01668 Ulp1 protease family protein similar to
At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
At1g52020, At3g24390, At4g05280, At1g25886, At4g03300;
contains Pfam profile PF02902: Ulp1 protease family,
C-terminal catalytic domain
Length = 1139
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/33 (30%), Positives = 23/33 (69%)
Frame = +1
Query: 88 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDN 186
S+++ + +E++S+ K+P VKK ++ E+D+
Sbjct: 839 SDNAAAVEAEEEKKSSPKVPKKVKKQLVYEQDD 871
>At1g34740.1 68414.m04319 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1383
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/33 (30%), Positives = 23/33 (69%)
Frame = +1
Query: 88 SESSTQINHNKEEQSTTKIPDSVKKIILMEKDN 186
S+++ + +E++S+ K+P VKK ++ E+D+
Sbjct: 810 SDNAAAVEAKEEKKSSPKVPKKVKKQLVYEQDD 842
>At5g65010.2 68418.m08178 asparagine synthetase 2 (ASN2) identical
to asparagine synthetase (ASN2) [Arabidopsis thaliana]
GI:3859536
Length = 579
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 588 ANWYIFXSLLNNRXIKFEQFTPLSFAVYVTR*VSNKMFPVIALRLAT 448
AN ++ ++L+N F TPL+ Y R + K FP + AT
Sbjct: 469 ANKHVSDTMLSNASFVFPDNTPLTKEAYYYRTIFEKFFPKQSAARAT 515
>At5g10240.1 68418.m01189 asparagine synthetase 3 (ASN3) identical
to asparagine synthetase (ASN3) [Arabidopsis thaliana]
GI:3859534
Length = 578
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 588 ANWYIFXSLLNNRXIKFEQFTPLSFAVYVTR*VSNKMFPVIALR 457
AN ++ ++L N F TPL+ Y R + K FP A R
Sbjct: 469 ANKHVSETMLMNASFVFPDNTPLTKEAYYYRTIFEKFFPKSAAR 512
>At4g21670.1 68417.m03139 double-stranded RNA-binding domain
(DsRBD)-containing protein contains Pfam profile
PF00035: Double-stranded RNA binding motif
Length = 981
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -1
Query: 535 AIYTIVIRC-LCHQMSVQQNVSSHCFEISYFHCLHYNKAILMFVG 404
AI T + C LC ++ + + + Y CL NK +M +G
Sbjct: 69 AILTTISSCGLCFKLEASPSPAQESLSLFYSSCLRDNKTAVMLLG 113
>At2g13540.1 68415.m01493 mRNA cap-binding protein (ABH1) identical
to mRNA cap binding protein [Arabidopsis thaliana]
GI:15192738; contains Pfam profile PF02854: MIF4G
domain; identical to cDNA nuclear cap-binding protein
CBP80 GI:8515770
Length = 848
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 145 PDSVKKI-ILMEKDNEANANRKSRIDLNALPTRQYLDQTVVPILL--QGLSALAKERPPD 315
P +K++ +EK EA + + ++ + L +T V +LL Q + KER PD
Sbjct: 692 PAKMKRLKSTVEKTGEAELSLRESLEAKEALLNRALSETEVLLLLLFQSFLGVLKERLPD 751
Query: 316 PINYLAAYLLKN 351
P + LK+
Sbjct: 752 PTKVRSVQDLKS 763
>At1g65040.1 68414.m07373 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 389
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/50 (24%), Positives = 23/50 (46%)
Frame = -1
Query: 532 IYTIVIRCLCHQMSVQQNVSSHCFEISYFHCLHYNKAILMFVGLLVDYCY 383
++ +++ CL S+QQ + S +S F Y V ++V Y +
Sbjct: 75 VFLLILDCLLTYSSIQQLIQSRKASMSVFFTFEYMILATTTVSIIVKYAF 124
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,445,031
Number of Sequences: 28952
Number of extensions: 226078
Number of successful extensions: 556
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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