Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_F09
         (527 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XX71 Cluster: Putative uncharacterized protein; n=1; ...    33   5.4  
UniRef50_Q8YS22 Cluster: Alr3269 protein; n=3; Nostocaceae|Rep: ...    32   7.1  
UniRef50_A5E668 Cluster: Putative uncharacterized protein; n=1; ...    32   7.1  

>UniRef50_Q4XX71 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 474

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 19/77 (24%), Positives = 40/77 (51%)
 Frame = +2

Query: 284 MSQNFFINYVPICQQIYMVHMNWAMSYLSSTXEKTRSSAXXKLLCQKIYSKXCSRFSXXA 463
           M+++FF + VPI  ++Y++H+ ++++Y  +   K  +S   K    +++   C       
Sbjct: 342 MTESFF-DLVPITNKVYLIHL-YSLNYNINNMNKCENSIIFKNCLNELFLDDCKSL-RKR 398

Query: 464 QKFTEYHSKLRIFILKQ 514
           +K   Y S  +IF L +
Sbjct: 399 EKVLLYISISKIFFLSK 415


>UniRef50_Q8YS22 Cluster: Alr3269 protein; n=3; Nostocaceae|Rep:
           Alr3269 protein - Anabaena sp. (strain PCC 7120)
          Length = 234

 Score = 32.3 bits (70), Expect = 7.1
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +3

Query: 321 VNRSTWCI*TGLCHICHQQXKRRVHLXTXNYFVKRFTPXCVADS-LXMHKSSLNIIQN*G 497
           VN+ST CI T LC    Q  ++  H+ T      R    C  D  L  H +++  ++N G
Sbjct: 65  VNKSTICIVTNLCENQTQTLQQSQHIWTIGR--DRHNGICTYDKLLSRHHAAIKYVENQG 122

Query: 498 F 500
           F
Sbjct: 123 F 123


>UniRef50_A5E668 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 1312

 Score = 32.3 bits (70), Expect = 7.1
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -3

Query: 222 RPFQ*YEANYKLTLFLMKFDIGIGLKTKLNKFILAK 115
           RP + YE ++ +T+   K DI IGLK KL+ +IL +
Sbjct: 839 RPIRLYEPSHIITVVPKKPDIKIGLKQKLDYYILGE 874


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,063,126
Number of Sequences: 1657284
Number of extensions: 7373618
Number of successful extensions: 14753
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14753
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33455602480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)