Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_F09
         (527 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0242 + 15969091-15969128,15970172-15970409,15971439-159716...    30   1.0  

>09_04_0242 +
           15969091-15969128,15970172-15970409,15971439-15971668,
           15972235-15972469,15973133-15973224,15973333-15973336
          Length = 278

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +1

Query: 184 GQFVICFISLKWAQYKLRNHNXNLNFKMEPTSTNVAELLHKLCSHLSTDLHG 339
           G+ V+CF+++ W Q  LRN        + P +T + E+L    + L +D  G
Sbjct: 221 GKEVLCFVTVSWIQDTLRNLQEVKKSGLGPNAT-IEEILESCFALLKSDEAG 271


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,968,070
Number of Sequences: 37544
Number of extensions: 183295
Number of successful extensions: 350
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 350
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)