Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_F09
         (527 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021488-2|CAA16367.2|  378|Caenorhabditis elegans Hypothetical ...    29   2.1  
AC025726-36|AAL27268.1|  487|Caenorhabditis elegans Hypothetical...    27   8.3  
AC025726-35|AAL27267.1|  489|Caenorhabditis elegans Hypothetical...    27   8.3  

>AL021488-2|CAA16367.2|  378|Caenorhabditis elegans Hypothetical
           protein Y45F10A.4 protein.
          Length = 378

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +1

Query: 262 KMEPTSTNVAELLHKLCSHLSTDLHGAYELGY 357
           +M   + N A+LLHK  +H STD+ G   LG+
Sbjct: 238 QMSRLNRNAAKLLHKYDAHSSTDVTGFGLLGH 269


>AC025726-36|AAL27268.1|  487|Caenorhabditis elegans Hypothetical
           protein Y71G12B.1b protein.
          Length = 487

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +1

Query: 217 WAQYKLRNHNXNLN-FKMEPTSTNVAELL--HKLCSH 318
           W +YK+ NHN ++N    +P+ T +A +   H L  H
Sbjct: 125 WIRYKVLNHNSDVNALCWDPSGTQLASVSNDHTLAVH 161


>AC025726-35|AAL27267.1|  489|Caenorhabditis elegans Hypothetical
           protein Y71G12B.1a protein.
          Length = 489

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +1

Query: 217 WAQYKLRNHNXNLN-FKMEPTSTNVAELL--HKLCSH 318
           W +YK+ NHN ++N    +P+ T +A +   H L  H
Sbjct: 127 WIRYKVLNHNSDVNALCWDPSGTQLASVSNDHTLAVH 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,478,615
Number of Sequences: 27780
Number of extensions: 191727
Number of successful extensions: 370
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 370
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)