Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_F06
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   2.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   2.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   2.8  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 133 LQTSAMKIRVRSSREPSQSFHRVCTGSPVRAATSIL 240
           + T+A  IRV S +EP+  F+ +       +A  IL
Sbjct: 139 IATAAFGIRVNSVQEPNNEFYAMGRSLTTFSAFQIL 174


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = +3

Query: 147 NEDQSQKFKGALAEFSSRLYRVAGQSSNFH-FVVAPLSIWLSLAALGXG 290
           N  +  KFK     F  + Y+V G    FH   +   S+ +   A+G G
Sbjct: 143 NGTEVAKFKNMWTRFQLKYYQVTGTPIIFHNLTLITYSLCVISWAVGIG 191


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = +3

Query: 147 NEDQSQKFKGALAEFSSRLYRVAGQSSNFH-FVVAPLSIWLSLAALGXG 290
           N  +  KFK     F  + Y+V G    FH   +   S+ +   A+G G
Sbjct: 143 NGTEVAKFKNMWTRFQLKYYQVTGTPIIFHNLTLITYSLCVISWAVGIG 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,961
Number of Sequences: 336
Number of extensions: 3170
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)