Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_F03
(530 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 233 2e-60
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 222 4e-57
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 200 1e-50
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 187 2e-46
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 161 7e-39
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 155 5e-37
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 150 2e-35
UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative; n... 144 1e-33
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 116 3e-33
UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7; T... 134 2e-30
UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1; Guilla... 129 5e-29
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 118 1e-25
UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1; Enceph... 112 4e-24
UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum... 93 3e-18
UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45; root|... 92 6e-18
UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus ... 88 1e-16
UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1; Methan... 84 2e-15
UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum... 81 1e-14
UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1; Archae... 80 4e-14
UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11; Eurya... 78 1e-13
UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4; Entamoeba|... 76 4e-13
UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5; Thermo... 73 4e-12
UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropy... 73 4e-12
UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiel... 71 1e-11
UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1; Nanoar... 71 2e-11
UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum ... 70 3e-11
UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4; Haloba... 69 5e-11
UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2; Neoptera... 64 1e-09
UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3; Sulfol... 64 1e-09
UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6; Methan... 62 1e-08
UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;... 60 3e-08
UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 58 1e-07
UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured... 58 2e-07
UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 56 7e-07
UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal ... 48 1e-04
UniRef50_Q53K43 Cluster: Retrotransposon protein, putative, uncl... 48 1e-04
UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large rib... 44 0.002
UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32; Bacter... 43 0.005
UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12; Bacter... 40 0.027
UniRef50_Q6G3I6 Cluster: 50S ribosomal protein L13; n=33; Bacter... 40 0.027
UniRef50_Q7XYN9 Cluster: Ribosomal protein rpL13; n=1; Bigelowie... 40 0.047
UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;... 39 0.083
UniRef50_Q67JX6 Cluster: 50S ribosomal protein L13; n=59; Bacter... 38 0.14
UniRef50_Q8DW98 Cluster: 50S ribosomal protein L13; n=42; Lactob... 37 0.25
UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.25
UniRef50_Q1IU84 Cluster: 50S ribosomal protein L13; n=17; Bacter... 37 0.33
UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1; Cyanidi... 36 0.58
UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13; ... 36 0.58
UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1; Arabido... 35 1.3
UniRef50_UPI00003C0D3F Cluster: PREDICTED: similar to CG9186-PB,... 34 1.8
UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondria... 34 1.8
UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candida... 32 7.2
UniRef50_A0PY48 Cluster: Sensor histidine kinase, putative; n=1;... 32 7.2
UniRef50_Q82UK0 Cluster: 50S ribosomal protein L13; n=30; Bacter... 32 9.5
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 233 bits (569), Expect = 2e-60
Identities = 102/163 (62%), Positives = 125/163 (76%)
Frame = +1
Query: 37 LATKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKR 216
L+ K I+IDGRGHLLGRLA+VIAK +L G KVVVVRCE + +SG+FF NK+K +++LRKR
Sbjct: 4 LSEKPILIDGRGHLLGRLASVIAKQILNGRKVVVVRCEDLQLSGHFFRNKIKFLAYLRKR 63
Query: 217 CNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXX 396
CNVNPARGPFHF APS +LWK VRGM+PHKT+RG NAL+RL+ Y+G P PFD
Sbjct: 64 CNVNPARGPFHFRAPSRMLWKAVRGMVPHKTKRGHNALKRLKVYEGIPSPFDRQKRLCVP 123
Query: 397 XXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
CL+P R +C VGR++HE+GWKYRDVV LE RK K+
Sbjct: 124 TAMRQLCLRPDRKFCDVGRVAHEVGWKYRDVVNNLEAKRKIKS 166
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 222 bits (543), Expect = 4e-57
Identities = 97/162 (59%), Positives = 121/162 (74%)
Frame = +1
Query: 37 LATKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKR 216
L + +VIDGRGHLLGRLA+V+AK LL+G KV VVRCE++N+SG+F+ NK+K +++LRKR
Sbjct: 4 LTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKR 63
Query: 217 CNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXX 396
CNVNPARGPFHF APS I +K VRGMIPHKT+RG+ AL RLR +DG P P+D
Sbjct: 64 CNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVP 123
Query: 397 XXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGK 522
L+ R YC VGRLSHE+GW Y+DV++ LE RK K
Sbjct: 124 IAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAK 165
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 200 bits (489), Expect = 1e-50
Identities = 89/160 (55%), Positives = 115/160 (71%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
K +V+D RGHLLGRLAA +AK LL G +VV VR E+INISG+ F NKLK +FL+KR N
Sbjct: 4 KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP RGPFHF +P+ ILW+T+RGMIPHKT RG AL RL+ ++G PPP+D
Sbjct: 64 NPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQAL 123
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKPGR +C +GRL+ E+GW++ D+V +LE+ RK K+
Sbjct: 124 RVLRLKPGRKFCVLGRLATEVGWRHSDLVTRLEEKRKTKS 163
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 187 bits (455), Expect = 2e-46
Identities = 81/163 (49%), Positives = 111/163 (68%)
Frame = +1
Query: 37 LATKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKR 216
++ + IV+D R H+LGRL++++AK LL G +VVVVRCE+I +SG K+K + FLRKR
Sbjct: 7 ISARRIVVDARHHMLGRLSSILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLRFLRKR 66
Query: 217 CNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXX 396
N P+ GP HF APS ILW+T+RGMIPHKT+RG AL RL+ Y+G PPP+D
Sbjct: 67 MNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAALARLKVYEGVPPPYDKIKRMVIP 126
Query: 397 XXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
L+ G YC +G+LS E+GW + D +++LED RK +A
Sbjct: 127 DALKVLRLQAGHKYCLLGKLSSEVGWNHYDTIKELEDKRKERA 169
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 161 bits (392), Expect = 7e-39
Identities = 76/165 (46%), Positives = 102/165 (61%)
Frame = +1
Query: 31 RALATKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLR 210
R + K +VID +GHLLGRLA+ +AK LL G ++VVVR E INISG+ F N++K FL
Sbjct: 71 RKMFDKLVVIDAKGHLLGRLASYVAKELLSGQRIVVVRTEAINISGSLFRNRVKFSEFLN 130
Query: 211 KRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXX 390
K N NP RG HF APS I W+ VRGM+PHKT +G AL RL+ ++G P P+D
Sbjct: 131 KWMNHNPRRGVQHFRAPSRIFWRAVRGMLPHKTPKGAAALERLKIFEGIPTPYDRVKKQV 190
Query: 391 XXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
L+ R C +G LS +GW + ++ KLE+ R+ +A
Sbjct: 191 VVDALKVQRLRNSRPVCKLGDLSASVGWGKQTLIEKLEEKRRARA 235
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 155 bits (377), Expect = 5e-37
Identities = 74/154 (48%), Positives = 98/154 (63%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
IVID +GH+LGRL+A++AK LL G++V +VRCE+ ISG F K + + KR N N
Sbjct: 4 IVIDCKGHILGRLSAIVAKELLHGHEVALVRCEKAIISGAFRDVKAHYLKKMHKRTNFNH 63
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXX 411
RGPFHF AP+ I+ +T+RGMIP+KT RG +A+ RLR YDG PP
Sbjct: 64 LRGPFHFRAPAEIVRRTIRGMIPYKTVRGSDAMSRLRVYDGIPPCCARYKRVVCPSAMAY 123
Query: 412 FCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXR 513
CL+P R C VGR++HEIGW++ V + E R
Sbjct: 124 LCLRPERRRCEVGRVAHEIGWQHAADVERYEKRR 157
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 150 bits (363), Expect = 2e-35
Identities = 68/160 (42%), Positives = 95/160 (59%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
K IVID +GHL GRLA++++K LL+G VVVVR E I +SG ++ + KR N
Sbjct: 3 KVIVIDAKGHLFGRLASIVSKQLLQGQHVVVVRTEGICMSGGMVRRRMAHDRYKNKRMNT 62
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP +GP+H+ +PS + WKTVRGM+PHKT RG A R + Y+G P P+D
Sbjct: 63 NPKKGPYHYTSPSRLFWKTVRGMLPHKTVRGAAAFERFKAYEGIPAPYDKVKRAVVPEAL 122
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
L G +C +G +IGWK+ +V++LE R+ A
Sbjct: 123 KVLRLGEGHRFCVLGDFCEQIGWKHGAIVKELEAKRQTAA 162
>UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein L13a,
putative - Leishmania major
Length = 222
Score = 144 bits (349), Expect = 1e-33
Identities = 73/159 (45%), Positives = 92/159 (57%), Gaps = 1/159 (0%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
IVID + H+LGR AAV+AK LL G K+ VVRCEQ+NI+G NK+K + +LRKR NP
Sbjct: 25 IVIDLKDHVLGRAAAVVAKQLLLGKKITVVRCEQLNIAGTEIRNKIKYLQYLRKRKLTNP 84
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXX-XXXX 408
+GPFH APS + +TVR M+P T+RG AL L Y+G PP
Sbjct: 85 TKGPFHHRAPSDVFVRTVRSMLPRYTKRGMKALNSLVAYEGIPPNVVRTGGRVVIPRAQR 144
Query: 409 XFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
C + R Y +G + +GWKY DVV LE R KA
Sbjct: 145 HVCYRSERPYTVLGNMCKHVGWKYSDVVANLEKARVEKA 183
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 116 bits (278), Expect(2) = 3e-33
Identities = 55/88 (62%), Positives = 67/88 (76%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+ GRGHLLG LAA +AK +L G KVVVV E INISGNF+ NKLK ++FL K+ N
Sbjct: 5 QVLVLSGRGHLLGCLAATVAKQVL-GCKVVVVHYEGINISGNFYRNKLKYLAFLCKQMNT 63
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKT 309
NP+RGP+ F APS I W T RGM+PHKT
Sbjct: 64 NPSRGPYRFQAPSRIFWWTARGMLPHKT 91
Score = 48.4 bits (110), Expect(2) = 3e-33
Identities = 19/36 (52%), Positives = 27/36 (75%)
Frame = +1
Query: 418 LKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+H++GWKY+ V LE+ RK KA
Sbjct: 98 LKPTRKFAYLGRLAHKVGWKYQAVTATLEENRKEKA 133
>UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein L13,
putative - Trichomonas vaginalis G3
Length = 200
Score = 134 bits (323), Expect = 2e-30
Identities = 69/158 (43%), Positives = 91/158 (57%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
IVID +GH+ GRLAA +AK LL+G KVVVVRCE+I ++G FL K N NP
Sbjct: 5 IVIDAKGHIQGRLAAAVAKQLLKGRKVVVVRCEEIELNGQHKFTVHTYERFLNKTTNSNP 64
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXX 411
GPFH AP I + VRGMIP+KT RG +A L+ Y+G P + +
Sbjct: 65 RDGPFHQRAPHEIFARAVRGMIPYKTHRGADAFANLQCYEGIPAKYVSYKRLVIPHALRC 124
Query: 412 FCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
+ R +GRLS +GWKY +VV +LE+ RK ++
Sbjct: 125 VSIHTDRPTTKLGRLSTTMGWKYGNVVAQLEEQRKAES 162
>UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1;
Guillardia theta|Rep: 60s ribosomal protein L13A -
Guillardia theta (Cryptomonas phi)
Length = 194
Score = 129 bits (311), Expect = 5e-29
Identities = 58/154 (37%), Positives = 91/154 (59%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
K V+D + HLLGR+A++ AK +L+G+K++++R E +I+G N K S +K+ N
Sbjct: 2 KIHVLDAKNHLLGRMASICAKKILQGDKIIIIRSELTSITGKLGRNVNKYKSIFKKKTNT 61
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP RGPFHF +PS IL++T++ MIPHKT RG AL+ L+ ++G P F
Sbjct: 62 NPRRGPFHFKSPSKILYQTIKRMIPHKTMRGSKALKNLKIFEGLPRIFSKIKKEKFFEAF 121
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLED 507
+K R ++G++ +GWK R + + D
Sbjct: 122 RYKVIKNYRKTVNLGKVCEVLGWKNRKFIEQKSD 155
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 118 bits (283), Expect = 1e-25
Identities = 61/148 (41%), Positives = 81/148 (54%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
+V+D R H+L RLA++IAK LL G +VV R N P
Sbjct: 12 VVVDARHHMLSRLASIIAKELLNGKRVV--------------------------RMNTKP 45
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXX 411
+ GP HF +P+ ILW+TVRGMIPHKT+RG+ AL RL+ Y+ PP+D
Sbjct: 46 SHGPIHFRSPAKILWRTVRGMIPHKTKRGEAALARLKAYEVVTPPYDRTKRMVIPDALKV 105
Query: 412 FCLKPGRNYCHVGRLSHEIGWKYRDVVR 495
L+PG YC +G+LS E+GW Y D +R
Sbjct: 106 LRLQPGHKYCLLGQLSKEVGWNYYDTIR 133
>UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13A
- Encephalitozoon cuniculi
Length = 198
Score = 112 bits (270), Expect = 4e-24
Identities = 60/155 (38%), Positives = 81/155 (52%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
++ID G + G+LAA +AK+LLEG +V VV E+ G+ K +L KRC VNP
Sbjct: 7 VIIDATGQVAGKLAAKVAKLLLEGVRVTVVCAEEAVFVGSLERAMDKFKQYLNKRCLVNP 66
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXX 411
RGPFHF P L K +R MI +K RGK A+ RL TY+G P +
Sbjct: 67 RRGPFHFREPRMHLAKIIRRMISYKKPRGKAAMSRLATYEGIPRELEGQPRYKVTCAFVK 126
Query: 412 FCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRK 516
+ P R Y +G+L GWK+ + + L D K
Sbjct: 127 YTGNPNR-YVTLGKLLSMFGWKHAEAAKSLTDELK 160
>UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L13 - Cenarchaeum
symbiosum
Length = 139
Score = 93.5 bits (222), Expect = 3e-18
Identities = 47/140 (33%), Positives = 72/140 (51%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNPA 234
++D H+ GRLA+ +AK+LLEGN+V ++ CE++ ISG + + FL+ ++P
Sbjct: 1 MVDATDHIAGRLASNVAKMLLEGNRVSIINCEKVMISGKRASIVREYRDFLKIASIIHPE 60
Query: 235 RGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXF 414
GP+H P I+ + +RGM+P K GK A RLR Y G P +
Sbjct: 61 HGPYHPRRPDTIMTRMIRGMLPRKKPSGKAAHSRLRAYIGSPGHLKSFEKRKLKGAEIT- 119
Query: 415 CLKPGRNYCHVGRLSHEIGW 474
+P NY + L +GW
Sbjct: 120 --RPTANYTTMADLGETVGW 137
>UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45;
root|Rep: 50S ribosomal protein L13P - Pyrococcus
horikoshii
Length = 142
Score = 92.3 bits (219), Expect = 6e-18
Identities = 52/142 (36%), Positives = 76/142 (53%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNPA 234
+I+ G +LGRLA+ +AK+LLEG +VV+V E+ I+GN K R NP
Sbjct: 3 IINADGLILGRLASRVAKMLLEGEEVVIVNAEKAVITGNREVIFSKYKQRTGLRTLTNPR 62
Query: 235 RGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXF 414
RGPF+ I+ +T+RGM+P KT+RG+ A RRL+ Y G P F +
Sbjct: 63 RGPFYPKRSDEIVRRTIRGMLPWKTDRGRKAFRRLKVYVGIPKEFQDKQLETIVEAHVSR 122
Query: 415 CLKPGRNYCHVGRLSHEIGWKY 480
+P Y VG ++ +G K+
Sbjct: 123 LSRP--KYVTVGEVAKFLGGKF 142
>UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L13
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 88.2 bits (209), Expect = 1e-16
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ IV+D H+ GRL++ +AK+L +G++V +V CE+I SG + FL +
Sbjct: 12 RPIVVDATNHIAGRLSSNVAKLLKQGHRVSIVNCEKIMYSGTRSNLIKEYREFLEINSII 71
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPH-KTERGKNALRRLRTYDGCPPPFDNXXXXXXXXX 402
NP GP H+ P I+ K +R M+P+ + GK +++RLR Y G P +
Sbjct: 72 NPKHGPVHYRRPDTIITKMIRQMLPYDRKPSGKESIKRLRAYIGSPKELKSLEKIQFEKA 131
Query: 403 XXXFCLKPGRNYCHVGRLSHEIGW 474
K NY +G L IGW
Sbjct: 132 KIK---KSPSNYTTMGELCRVIGW 152
>UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L13P -
Methanopyrus kandleri
Length = 159
Score = 84.2 bits (199), Expect = 2e-15
Identities = 49/141 (34%), Positives = 75/141 (53%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNPA 234
VID +LGRLA+V+AK +L+G ++ V+ E+ I+G N +K +L+K +P
Sbjct: 17 VIDAENAVLGRLASVVAKRILKGERIAVINTEKAIITGK--KNTIK-EEWLQKIQRGDPK 73
Query: 235 RGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXF 414
+GPF+ P I + VRGM+P KT+RG+ A +RLR Y G P +
Sbjct: 74 KGPFYPRRPDLIFRRVVRGMLPWKTKRGREAFKRLRAYIGTPRWVEEANIEPERVAEADM 133
Query: 415 CLKPGRNYCHVGRLSHEIGWK 477
Y +G LS E+G++
Sbjct: 134 SRLGHLWYVTLGELSEELGYQ 154
>UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L13 - Thermofilum
pendens (strain Hrk 5)
Length = 154
Score = 81.4 bits (192), Expect = 1e-14
Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLK-LMSFLRKRCN 222
+AIVIDG GH+ GRLA+V+AK LL+G++VVVV E+I I+G K L ++ +
Sbjct: 6 EAIVIDGTGHIAGRLASVVAKRLLKGDRVVVVNAEKIVITGKPKRVVEKYLKRWVEWKTY 65
Query: 223 VNP-ARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDN 375
NP RGP + P + + VRGM+P + G+++L+RL Y G P + N
Sbjct: 66 YNPELRGPKYPKTPDRLFKRMVRGMLPMEKTIGRDSLKRLTVYVGLPDEYRN 117
>UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L13P -
Archaeoglobus fulgidus
Length = 156
Score = 79.8 bits (188), Expect = 4e-14
Identities = 43/110 (39%), Positives = 64/110 (58%)
Frame = +1
Query: 31 RALATKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLR 210
+ L VID GH+LGRL++ IAK LL G ++VVV E+ I+G+ + + +
Sbjct: 10 KTLGDDFTVIDASGHILGRLSSKIAKRLLNGERIVVVNAEKAVITGDKY---MVFERYKE 66
Query: 211 KRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCP 360
K + +GP+ P I +TVRGM+P K+ RG++A RRLR + G P
Sbjct: 67 KYDRGSKEKGPYFPRHPERIFKRTVRGMLPWKSSRGRDAYRRLRVFMGVP 116
>UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L13P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 140
Score = 77.8 bits (183), Expect = 1e-13
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLLEGN-KVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
VID +G +LGRLA+ +AK LL G+ KV ++ E+ ISG+ L + R
Sbjct: 3 VIDAKGLILGRLASSVAKQLLSGDEKVYIINAEKAIISGS---RAATLREYRETRDRGAT 59
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXX 411
GP+ P IL +T+RGM+P+K RG++A+ RL+ Y G P++
Sbjct: 60 EFGPYFPKRPDRILKRTIRGMLPYKRARGRDAMSRLKVYVGV--PYELKGAETTTIADAD 117
Query: 412 FCLKPGRNYCHVGRLSHEIGWKY 480
L Y +G +S ++G K+
Sbjct: 118 MRLLSSNKYVELGEVSQKMGSKF 140
>UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4;
Entamoeba|Rep: Ribosomal protein L13A - Entamoeba dispar
Length = 87
Score = 76.2 bits (179), Expect = 4e-13
Identities = 35/78 (44%), Positives = 50/78 (64%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
K VID GH+LGR+A+V+AK LL G K+V+VRCE + + G ++ + RKR N
Sbjct: 10 KVTVIDCHGHVLGRVASVVAKHLLLGQKIVLVRCEDLQVCGTLKMRLVQWELYQRKRVNT 69
Query: 226 NPARGPFHFXAPSXILWK 279
NP RG FH +P+ ++ K
Sbjct: 70 NPTRGAFHHRSPAEMVRK 87
>UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L13P -
Pyrobaculum aerophilum
Length = 187
Score = 72.9 bits (171), Expect = 4e-12
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLE--GNKVVVVRCEQINISGNFFTNKLKLMSFLRK---- 213
+++D GH+ GRLA IAK LLE ++VVV E++ I+G+ K+ + F RK
Sbjct: 19 VIVDAEGHVAGRLATYIAKALLERPNLRIVVVNAEKLVITGD---EKMVIEWFKRKISEW 75
Query: 214 RCNVNPAR-GPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCP 360
R + NP + GP P + + VRGM+P K+E G++AL+RLR Y P
Sbjct: 76 RTHYNPEKAGPKVPRRPDRVFKRIVRGMLPKKSETGRSALKRLRVYMSIP 125
>UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L13P - Aeropyrum
pernix
Length = 155
Score = 72.9 bits (171), Expect = 4e-12
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGN-FFTNKLKLMSFLRKRCN 222
+ IV+DG G ++GRLA+V+AK+LL G +V VV E+I +SG+ + + L + +
Sbjct: 9 REIVVDGSGMIMGRLASVVAKLLLAGWRVNVVNAEKIVLSGDPRMVVESYRTTVLGVKSH 68
Query: 223 VNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXX 402
+ P P + VRGM+P RG+ AL RLR Y G P D
Sbjct: 69 FSHKWRPKRPRTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVP---DELKGREFVRF 125
Query: 403 XXXFCLKPGRNYCHVGRLSHEIGWK 477
+ +Y +G ++ ++GWK
Sbjct: 126 PEADASRLSSHYIELGAVARQLGWK 150
>UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L13A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 181
Score = 71.3 bits (167), Expect = 1e-11
Identities = 39/146 (26%), Positives = 69/146 (47%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
K IVIDGR L+GRLA+ I +L +G + V+RC+ + SG + +++ +
Sbjct: 3 KTIVIDGRNQLIGRLASNIVILLKKGYTLKVIRCKDLVFSGRYEHVYNRILKKKNLKTRT 62
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP +GP+ F PS +L K V+GM+ + + + ++ P +
Sbjct: 63 NPNKGPYFFSNPSSLLKKIVKGMLNKLNKSHTLLFKSVECFNDTPNRYIYNYKLFLKNSH 122
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYR 483
+ LKP + + + + GW+ R
Sbjct: 123 KNYKLKPDSKFTKLYEILPKFGWQDR 148
>UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L13P -
Nanoarchaeum equitans
Length = 162
Score = 70.5 bits (165), Expect = 2e-11
Identities = 37/103 (35%), Positives = 62/103 (60%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
++ D G +LGRLA+++A+ L G +V +V E+ I+G+ N +K +L+K +
Sbjct: 7 LIYDAEGLVLGRLASIVARNLKRGYRVKIVNAEKAIITGD--PNMVK-KEWLQKVKRGDY 63
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCP 360
+GPF+ P IL + +RGM+P KT RG+ L+ ++ Y G P
Sbjct: 64 YKGPFYPKRPDNILKRVIRGMLPRKTARGRELLKNVKVYIGVP 106
>UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L13 -
Halorubrum lacusprofundi ATCC 49239
Length = 149
Score = 70.1 bits (164), Expect = 3e-11
Identities = 36/103 (34%), Positives = 58/103 (56%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
+V+D R +LGR+++ +A+ +L+G V VV E+ I+GN + M R +
Sbjct: 10 VVVDARDCILGRVSSKVAQRVLDGETVAVVNAERAVITGN----EEATMETYHTRAELGS 65
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCP 360
GP++ P I + +RGM+P+KTE G+ AL +R Y G P
Sbjct: 66 DSGPYYPKRPDRIFKRAIRGMLPYKTEDGREALSNVRVYVGNP 108
>UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 145
Score = 69.3 bits (162), Expect = 5e-11
Identities = 34/103 (33%), Positives = 59/103 (57%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
+++D R ++GR+A+ +A+ L+G V VV E+ I+G + +++ KR ++
Sbjct: 10 VIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITGR----EEQIVEKYEKRVDIGN 65
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCP 360
G F+ P I +T+RGM+PHK +RG+ A +R Y G P
Sbjct: 66 DNGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLGNP 108
>UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2;
Neoptera|Rep: Ribomsomal protein L13Ae - Cicindela
campestris (Green tiger beetle)
Length = 78
Score = 64.5 bits (150), Expect = 1e-09
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +1
Query: 415 CLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGK 522
CLKPGR YCHVGRLSHE+GWKY+ V+ LE R+ K
Sbjct: 4 CLKPGRKYCHVGRLSHEVGWKYQKVIESLEHKRQVK 39
>UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3;
Sulfolobaceae|Rep: 50S ribosomal protein L13P -
Sulfolobus solfataricus
Length = 149
Score = 64.5 bits (150), Expect = 1e-09
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISG--NFFTNKLKLMSFLRKRC 219
+ ++I+ G +LGR+A+ + ++L EG KV++V E+ ISG N KL+ L +
Sbjct: 8 QVVIINAEGQILGRMASNVVRLLKEGKKVIIVNGEKAVISGEKNRVIESYKLL--LTVKT 65
Query: 220 NVNPAR-GPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXX 396
NP R G +P I+ +T+RGM+P K+ +G+ L+ ++ Y G P F+
Sbjct: 66 LFNPYRNGIRRPRSPINIVKRTIRGMLP-KSSKGRRMLKNVKIYVGVPKEFEGRQFIKFP 124
Query: 397 XXXXXFCLKPGRNYCHVGRLSHEIGW 474
LK G+ Y V +S E+GW
Sbjct: 125 DSDVS-RLK-GK-YVTVEVVSKELGW 147
>UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6;
Methanococcales|Rep: 50S ribosomal protein L13P -
Methanococcus maripaludis
Length = 137
Score = 61.7 bits (143), Expect = 1e-08
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
+V++ ++GRLA+ +AK+ L G ++ VV E+ ++GN K + ++ NP
Sbjct: 2 VVVNAENAVVGRLASYVAKLALSGEEITVVNAEKAIMTGNKEYIFQKYVQLRTRKSISNP 61
Query: 232 AR-GPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCP 360
+ GP + P I+ + +RGM+P+K RG A ++++ G P
Sbjct: 62 KKMGPKYPRRPDDIVRRVIRGMLPYKKPRGVEAFKKIKIEVGVP 105
>UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;
n=1; Pisum sativum|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 255
Score = 60.1 bits (139), Expect = 3e-08
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +1
Query: 76 LLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNPARGPFHF 252
+LGRLA+++AK L + +VRCE+I ISG K+K M FLR+R N P+ GP F
Sbjct: 1 MLGRLASIVAKELSMVRRSFLVRCEEICISGGLGRQKMKYMRFLRRRMNTKPSHGPITF 59
>UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L13P -
Picrophilus torridus
Length = 138
Score = 58.0 bits (134), Expect = 1e-07
Identities = 31/108 (28%), Positives = 52/108 (48%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNP 231
I ID H+ GRL++ +AK LL G + +V ++ I+G + + F R +
Sbjct: 2 IYIDASNHIYGRLSSYVAKKLLNGESITIVNASKVVITGR---KEFIIDKFNNLRNTGSI 58
Query: 232 ARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDN 375
+GP++ IL +++ M+P K G AL+R Y P +N
Sbjct: 59 RKGPYYPKTADRILKRSIGDMLPKKKTHGMEALKRCMVYANVPKSLEN 106
>UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L13P -
uncultured organism HF70_19B12
Length = 161
Score = 57.6 bits (133), Expect = 2e-07
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 8/111 (7%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLL----EGN--KVVVVRCEQINISGNFFTNKLKLMSFLRK 213
+V D +LGRLA+ IAK LL EG+ +V+++ E ++G K ++++ +
Sbjct: 7 LVFDAHDKVLGRLASHIAKTLLVTRREGDPKRVIIINAEMAIVTGP----KDRILADYDR 62
Query: 214 RCNVN-PARGPFHFXAPSXILWKTVRGMIPH-KTERGKNALRRLRTYDGCP 360
+ +N P +GPF P IL +TVRGM+P+ K G+ A++ LR G P
Sbjct: 63 KYKLNHPRKGPFFPRMPDMILKRTVRGMLPYQKKSSGRQAVKDLRVMIGTP 113
>UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4;
Thermoprotei|Rep: 50S ribosomal protein L13P -
Sulfolobus acidocaldarius
Length = 148
Score = 55.6 bits (128), Expect = 7e-07
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFL-RKRCNVN 228
+++D +LGR++ IAK+L G KV VV E+ ISG + L+ S L + N
Sbjct: 8 VIVDATNQILGRMSTHIAKLLKSGKKVYVVNAEKAIISGP-RSRVLEGYSLLFTVKTMQN 66
Query: 229 PAR-GPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCP 360
P R G P I+ +TVRGM+P K + GK R L+ Y G P
Sbjct: 67 PYRQGIRRPRNPINIVKRTVRGMLP-KNKLGKQIYRNLKAYIGIP 110
>UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal
protein L13a; n=2; Bos taurus|Rep: PREDICTED: similar to
ribosomal protein L13a - Bos taurus
Length = 112
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/103 (26%), Positives = 43/103 (41%)
Frame = +1
Query: 196 MSFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDN 375
+ + + NP+ GPF F P I TV+ ++P+K + + L L+ +D +
Sbjct: 6 LDLFHRPLDTNPSNGPFQFWVPKHIFRHTVQDLLPYKIKHDQETLEHLKVFDKTKQMIIS 65
Query: 376 XXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLE 504
CL G L++E GWKY+ V LE
Sbjct: 66 VQICVSEATSRFACL---------GYLTYESGWKYQVVTNTLE 99
>UniRef50_Q53K43 Cluster: Retrotransposon protein, putative,
unclassified; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 512
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +1
Query: 313 RGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHE 465
RG+ AL RL+ Y+G PPP+D L+PG YC +G+LS E
Sbjct: 9 RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKE 59
>UniRef50_A4RYI1 Cluster: Plastid ribosomal protein L13 large
ribosomal subunit; n=2; Ostreococcus|Rep: Plastid
ribosomal protein L13 large ribosomal subunit -
Ostreococcus lucimarinus CCE9901
Length = 218
Score = 44.0 bits (99), Expect = 0.002
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGN------------KVVVVRCEQINISGNFFTNKLKL 195
+VID G LGRL+ V A L GN VVV+ ++I ++GN KL
Sbjct: 75 VVIDAAGLRLGRLSTVAATYLRGGNSGCYTPAFNMGVNVVVINADKIVVTGNKANQKLYY 134
Query: 196 MSFLRKR--CNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 366
+R + H P+ ++ K ++GM+P K G+ L+ Y G P
Sbjct: 135 TLGVRGKPGSMKEETYASLHARQPARVIEKAIKGMLP-KNRMGRETFTHLKVYAGADHP 192
>UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32;
Bacteria|Rep: 50S ribosomal protein L13 -
Prochlorococcus marinus (strain MIT 9313)
Length = 150
Score = 42.7 bits (96), Expect = 0.005
Identities = 35/116 (30%), Positives = 48/116 (41%), Gaps = 12/116 (10%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISGNFFTNKLKLM 198
++D LGRLA +A VL NK VVVV ++I +SGN KL
Sbjct: 18 LVDAENQTLGRLATEVASVLRGKNKPSFTPHLDTGDFVVVVNADKIRVSGNKANQKLYRR 77
Query: 199 SFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 366
R P I+ K ++GM+PH G+ R+L+ Y G P
Sbjct: 78 HSGRPGGMKVETFQALQDRLPERIVEKAIKGMLPHNA-LGRQLFRKLKVYRGPEHP 132
>UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12;
Bacteria|Rep: 50S ribosomal protein L13 - Synechococcus
sp. (strain CC9902)
Length = 150
Score = 40.3 bits (90), Expect = 0.027
Identities = 34/116 (29%), Positives = 47/116 (40%), Gaps = 12/116 (10%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFTNKLKLM 198
V+D LGRLA +A +L G+ VVVV E+I +SG KL
Sbjct: 18 VVDAENQTLGRLATEVASILRGKNNPNFTPHLDTGDFVVVVNAEKIQVSGKKPQQKLYRR 77
Query: 199 SFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 366
R P I+ K ++GM+PH G+ R+L+ Y G P
Sbjct: 78 HSGRPGGMKVETFESLQERIPERIVEKAIKGMLPHNA-LGRQMYRKLKVYKGTEHP 132
>UniRef50_Q6G3I6 Cluster: 50S ribosomal protein L13; n=33;
Bacteria|Rep: 50S ribosomal protein L13 - Bartonella
henselae (Rochalimaea henselae)
Length = 154
Score = 40.3 bits (90), Expect = 0.027
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 17/124 (13%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFTNK- 186
K ++ID +LGRLAA +A L +G+ V+V+ ++I+++G +T+K
Sbjct: 14 KWVIIDAENLVLGRLAAFVANRLRGKHKATFTPHVDDGDNVIVINADKISLTGKKYTDKK 73
Query: 187 ----LKLMSFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDG 354
+ ++KR G F P ++ K V MIP + G+ L+ LR Y G
Sbjct: 74 YYWHTGYIGGIKKRTARQILEGRF----PERVVEKAVERMIP-RGPLGRRQLKNLRVYAG 128
Query: 355 CPPP 366
P
Sbjct: 129 SQHP 132
>UniRef50_Q7XYN9 Cluster: Ribosomal protein rpL13; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpL13 - Bigelowiella
natans (Pedinomonas minutissima) (Chlorarachnion
sp.(strain CCMP 621))
Length = 273
Score = 39.5 bits (88), Expect = 0.047
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFTNKL-K 192
IV+D + +LGRLA++ A +++ G VV++ +++ ++G +T+KL K
Sbjct: 127 IVLDAQDQILGRLASLAATLVMGKWHPLYHPAMNMGAHVVIINADKVRVTGRKYTDKLYK 186
Query: 193 LMSFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 366
R + A P I+ ++GM+P KT G+ ++L Y G P
Sbjct: 187 RHVTGRPGSMKSEAFRDLQARIPERIVEVAIKGMLP-KTRLGREQFKQLHIYAGDENP 243
>UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;
n=1; Cyanidium caldarium|Rep: Putative uncharacterized
protein rpl13 - Cyanidium caldarium
Length = 143
Score = 38.7 bits (86), Expect = 0.083
Identities = 29/110 (26%), Positives = 50/110 (45%)
Frame = +1
Query: 37 LATKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKR 216
+ATKA +I L+G+ + + + N V+++ Q+ I+GN T K+ +
Sbjct: 29 IATKAAII-----LMGKNRSTYSYNSMSANFVIIINSRQVAITGNKNTQKVYKRYSAKPG 83
Query: 217 CNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 366
+ P+ IL + V+GM+P K+ GK L+ Y G P
Sbjct: 84 ATKTESFYHLKKRIPNRILEQAVKGMLP-KSVLGKKMFSHLKVYAGDSHP 132
>UniRef50_Q67JX6 Cluster: 50S ribosomal protein L13; n=59;
Bacteria|Rep: 50S ribosomal protein L13 -
Symbiobacterium thermophilum
Length = 143
Score = 37.9 bits (84), Expect = 0.14
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 12/119 (10%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLE------------GNKVVVVRCEQINISGNFFTNKL 189
K V+D G LGRLA+ +A +L G+ V++V E+I ++G T+K+
Sbjct: 15 KWYVVDAEGKTLGRLASKVAAILRGKHKPTFTPHVDCGDFVIIVNAEKIQVTGKKVTDKV 74
Query: 190 KLMSFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 366
P +L ++GM+PH G+ R+L+ Y G P
Sbjct: 75 YYRHSGYPGGQKATTFEQMIARRPERVLELAIKGMLPH-NRLGRQMYRKLKVYAGPEHP 132
>UniRef50_Q8DW98 Cluster: 50S ribosomal protein L13; n=42;
Lactobacillales|Rep: 50S ribosomal protein L13 -
Streptococcus mutans
Length = 148
Score = 37.1 bits (82), Expect = 0.25
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNK------------VVVVRCEQINISGNFFTNKL 189
K ++D LGRL+AV+A VL NK V+V+ E++ ++G NK+
Sbjct: 16 KWYIVDATDVPLGRLSAVVASVLRGKNKPTFTPHTDTGDFVIVINAEKVKLTGKKAANKI 75
Query: 190 KLMSFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDG 354
+ + G ++ K+V+GM+PH T G+ +L+ + G
Sbjct: 76 YYTHSMYPGGLKQISAGELRSKNAVRLIEKSVKGMLPHNT-LGRAQGMKLKVFVG 129
>UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 106
Score = 37.1 bits (82), Expect = 0.25
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = -1
Query: 335 LLRAFLPRSVLCGIMPLTVFHRXLDGAXKWKGPRAGFTLHLLRRNDISLSLFVKKLPEML 156
+LR F R+ L FHR +W+ R+G + + + +S S F+KK+P
Sbjct: 1 MLRYFSQRNSLAACSSSGCFHRL-----EWRACRSGESPYKFQSLSVSRSKFIKKVPSGR 55
Query: 155 ICSQRTTTTLFPSRR 111
+ SQ T+ P RR
Sbjct: 56 VISQSTSAFWLPFRR 70
>UniRef50_Q1IU84 Cluster: 50S ribosomal protein L13; n=17;
Bacteria|Rep: 50S ribosomal protein L13 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 36.7 bits (81), Expect = 0.33
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Frame = +1
Query: 37 LATKAIVIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFT 180
+A K V+D G LGRLA+ +A++L G+ VVV+ E+I I+G
Sbjct: 10 VARKWFVVDADGQTLGRLASRVARILSGKDNPKYTPFIDTGDHVVVINAEKIKITGLKAD 69
Query: 181 NKLKLMSFLRKRCNVNPARGPFHF-XAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGC 357
NK K + + P IL ++GM+P K++ GK +L+ Y G
Sbjct: 70 NK-KYYHYSGYPGGMKEEEFLKRLERRPELILETAIKGMLP-KSKLGKAMGGKLKVYRGA 127
Query: 358 PPP 366
P
Sbjct: 128 DHP 130
>UniRef50_Q85FU2 Cluster: 50S ribosomal protein L13; n=1;
Cyanidioschyzon merolae|Rep: 50S ribosomal protein L13 -
Cyanidioschyzon merolae (Red alga)
Length = 98
Score = 35.9 bits (79), Expect = 0.58
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Frame = +1
Query: 52 IVIDGRGHLLGRLAAVIAKVLLEGNK--VVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
++I+ + +LGRLA+ + K LL + + +V+ QI ++GN + NK S+ R
Sbjct: 1 MLINAKDEILGRLASRVVKTLLTQSVTCIEIVQANQIQVTGNKYKNK----SYRRHSGRP 56
Query: 226 NPAR-GPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLR 342
+ F+ L ++GM+P K +G+ R++R
Sbjct: 57 GGMKIRYFYQIGGKRALEHAIKGMLP-KGVKGRQLWRKIR 95
>UniRef50_Q2IA19 Cluster: Chloroplast 50S ribosomal protein L13;
n=1; Pavlova lutheri|Rep: Chloroplast 50S ribosomal
protein L13 - Pavlova lutherii (Monochrysis lutheri)
Length = 225
Score = 35.9 bits (79), Expect = 0.58
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 12/112 (10%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFTNKLKLM 198
VID G LGR+A IAK L+ G+ V+V+ +++ ISG F K
Sbjct: 73 VIDAEGMRLGRMATEIAKRLMGKHKVTFFPGSNMGDYVIVINADKVVISGAKFYQKEYFR 132
Query: 199 SFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDG 354
R + P I+ K V+GM+P K G+ R L+ + G
Sbjct: 133 HSGRPGGVTVESFEQLQARIPERIVEKAVKGMLP-KGPLGREQFRHLKVFAG 183
>UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1;
Arabidopsis thaliana|Rep: 60S L13 ribosomal protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 61
Score = 34.7 bits (76), Expect = 1.3
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 457 SHEIGWKYRDVVRKLEDXRKGK 522
+HE+GW+Y+ +V KLE+ RK K
Sbjct: 1 AHEVGWQYQGIVEKLEEKRKVK 22
>UniRef50_UPI00003C0D3F Cluster: PREDICTED: similar to CG9186-PB,
isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG9186-PB, isoform B - Apis mellifera
Length = 309
Score = 34.3 bits (75), Expect = 1.8
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -3
Query: 330 KSILATLCFVW--DHASYSLP*NXRWSXKMERSTSRIHVAPLTQE*HKLEFVRKEVARDV 157
KS L T VW HA + P N S H + +TQ HK++F++K V DV
Sbjct: 56 KSKLPTEVPVWIISHAGHVQPPNNLAITMPSNSNWTEHYSLMTQVQHKIDFIKKYVPEDV 115
Query: 156 DLFAANHN 133
+ H+
Sbjct: 116 KIHLIGHS 123
>UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondrial
precursor; n=12; Saccharomycetales|Rep: 54S ribosomal
protein L23, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 163
Score = 34.3 bits (75), Expect = 1.8
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 121 GNKVVVVRCEQINISGNFFTNKLKLMSFLRK-RCNVNPARGPFHFXAPSXILWKTVRGMI 297
G+ VVV C++I ++G F K R + + IL K V GM+
Sbjct: 54 GDYVVVTNCQKIRVTGKKFEQKTYWSHSGRPGQLKLQTMNKVVADKGFGEILKKAVSGML 113
Query: 298 PHKTERGKNALRRLRTYDGCPPPF 369
P K + K L RL+ +DG P+
Sbjct: 114 P-KNKLRKQRLDRLKVFDGSENPY 136
>UniRef50_Q8KTT2 Cluster: 50S ribosomal protein L13; n=1; Candidatus
Tremblaya princeps|Rep: 50S ribosomal protein L13 -
Tremblaya princeps
Length = 124
Score = 32.3 bits (70), Expect = 7.2
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 12/101 (11%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVL------------LEGNKVVVVRCEQINISGNFFTNKLKLM 198
V+D RG +LGRLA +A +L N V V+ CE + ISG+ K+
Sbjct: 8 VLDARGMVLGRLAVTVAGLLRGKYKASYAHNAAPHNAVTVLNCEHVRISGSKAVGKVYYR 67
Query: 199 SFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGK 321
+P+ +L V GM+P R +
Sbjct: 68 HSGHPGGLRRTKLHDLMLRSPATVLRAAVHGMLPRNRLRDR 108
>UniRef50_A0PY48 Cluster: Sensor histidine kinase, putative; n=1;
Clostridium novyi NT|Rep: Sensor histidine kinase,
putative - Clostridium novyi (strain NT)
Length = 405
Score = 32.3 bits (70), Expect = 7.2
Identities = 20/83 (24%), Positives = 42/83 (50%)
Frame = +1
Query: 76 LLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNVNPARGPFHFX 255
++ +LA++I L NK++ ++ E++N ++ K+ R + N+N ++
Sbjct: 240 VVNKLASIIRDTLENANKIITLK-EEVNCILSYL-ELCKIKFGDRLKFNINIEEKYYNIK 297
Query: 256 APSXILWKTVRGMIPHKTERGKN 324
PS I++ V I H +R K+
Sbjct: 298 IPSMIIYTFVENAINHGIKRKKD 320
>UniRef50_Q82UK0 Cluster: 50S ribosomal protein L13; n=30;
Bacteria|Rep: 50S ribosomal protein L13 - Nitrosomonas
europaea
Length = 144
Score = 31.9 bits (69), Expect = 9.5
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Frame = +1
Query: 55 VIDGRGHLLGRLAAVIAKVLL------------EGNKVVVVRCEQINISGNFFTNKLKLM 198
V+D +LGRLAA IA L G+ +VV+ +++ ++GN +K
Sbjct: 17 VVDATDKVLGRLAAAIAHRLRGKHKPIYTPHVDTGDYIVVINADKLRVTGNKAEDKKYYR 76
Query: 199 SFLRKRCNVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 366
H P+ L K V+GM+P K G +++L+ Y G P
Sbjct: 77 HSGYPGGIYETTFKKMHERFPTRPLEKAVKGMLP-KGPLGYAMIKKLKIYAGDTHP 131
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,949,515
Number of Sequences: 1657284
Number of extensions: 9679820
Number of successful extensions: 23234
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 22726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23200
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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