Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_F03
(530 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 214 2e-55
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 214 2e-55
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 214 2e-55
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 214 2e-55
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 214 2e-55
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 214 2e-55
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 214 2e-55
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 214 2e-55
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 214 2e-55
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 214 2e-55
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 212 8e-55
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 204 2e-52
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 129 5e-30
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 128 2e-29
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 66 7e-11
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 214 bits (522), Expect = 2e-55
Identities = 95/160 (59%), Positives = 120/160 (75%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 214 bits (522), Expect = 2e-55
Identities = 95/160 (59%), Positives = 120/160 (75%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 214 bits (522), Expect = 2e-55
Identities = 95/160 (59%), Positives = 120/160 (75%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 214 bits (522), Expect = 2e-55
Identities = 95/160 (59%), Positives = 120/160 (75%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 214 bits (522), Expect = 2e-55
Identities = 95/160 (59%), Positives = 120/160 (75%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 214 bits (522), Expect = 2e-55
Identities = 95/160 (59%), Positives = 120/160 (75%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 62
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 63 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 122
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA
Sbjct: 123 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 162
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 214 bits (522), Expect = 2e-55
Identities = 95/160 (59%), Positives = 120/160 (75%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 214 bits (522), Expect = 2e-55
Identities = 95/160 (59%), Positives = 120/160 (75%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 214 bits (522), Expect = 2e-55
Identities = 95/160 (59%), Positives = 120/160 (75%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 214 bits (522), Expect = 2e-55
Identities = 95/160 (59%), Positives = 120/160 (75%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 212 bits (517), Expect = 8e-55
Identities = 94/160 (58%), Positives = 119/160 (74%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL L+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 204 bits (498), Expect = 2e-52
Identities = 91/160 (56%), Positives = 117/160 (73%)
Frame = +1
Query: 46 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFTNKLKLMSFLRKRCNV 225
+ +V+DGRGHLLGRLAA++AK +L G KVVVV CE INISGNF+ NKL ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNT 64
Query: 226 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 405
+P+RGP+HF APS + W+TVRGM+PHKT+RG+ AL RL+ DG PPP+D
Sbjct: 65 SPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAAL 124
Query: 406 XXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 164
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 129 bits (312), Expect = 5e-30
Identities = 55/102 (53%), Positives = 70/102 (68%)
Frame = +1
Query: 220 NVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 399
N NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 400 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LED RK KA
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEDKRKEKA 103
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 128 bits (308), Expect = 2e-29
Identities = 54/102 (52%), Positives = 70/102 (68%)
Frame = +1
Query: 220 NVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 399
N NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 400 XXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDXRKGKA 525
LKP R + ++GRL+HE+GWKY+ V LE+ RK KA
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKA 103
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 66.1 bits (154), Expect = 7e-11
Identities = 31/78 (39%), Positives = 43/78 (55%)
Frame = +1
Query: 292 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIG 471
M+ HKT+RG +L L+ +DG PPP+D LKP R + +GR + E+
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 472 WKYRDVVRKLEDXRKGKA 525
WKY+ V LE+ RK KA
Sbjct: 61 WKYQAVTATLEEKRKEKA 78
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,733,171
Number of Sequences: 237096
Number of extensions: 1608851
Number of successful extensions: 10567
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10567
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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