Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_E21
(640 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35) 81 7e-16
SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35) 56 2e-08
SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0) 54 7e-08
SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0) 50 1e-06
SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0) 49 4e-06
SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43) 48 6e-06
SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38) 42 4e-04
SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2) 39 0.003
SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08) 38 0.007
SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13) 33 0.26
SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06) 32 0.34
SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09) 29 3.2
SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08) 29 4.2
SB_37997| Best HMM Match : Chordopox_A13L (HMM E-Value=2.1) 28 5.6
SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
>SB_46721| Best HMM Match : Tetraspannin (HMM E-Value=4e-35)
Length = 642
Score = 81.0 bits (191), Expect = 7e-16
Identities = 34/87 (39%), Positives = 51/87 (58%)
Frame = +3
Query: 360 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKN 539
CCGA KEN CM+I F + LLI+ E+A + GY+ ++ + ++ +I +YP KN
Sbjct: 425 CCGAWKENKCMLILFFILLLIVLGLEIAAAVLGYINKDKIQSDLTDDIIRNIKEYP--KN 482
Query: 540 VXXTIDIIQTDLQCCGINSPADWADHG 620
ID +Q D +CCG P+DW +G
Sbjct: 483 NKAAIDAMQMDFECCGAKGPSDWTFYG 509
>SB_1751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = +3
Query: 360 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKN 539
CCGA KEN CM+I F FLL++ + E+ G Y +E+ + +++ +I YP KN
Sbjct: 72 CCGAWKENKCMLICFFAFLLLLLILEIVGGALAYNNKDKIENRLDKDILKAIENYP-GKN 130
Query: 540 VXXTIDIIQTDLQCCGINSPADW 608
+I+ +QT +CCG ++ DW
Sbjct: 131 -EKSINDMQTKFKCCGADNYTDW 152
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +3
Query: 447 GIAGYMKHTDLEDSVMRNLNASITQYPVXKNVXXTIDIIQTDLQCCGINSPADW 608
G+A + ++D + L I Y + +D +Q ++CCGI + DW
Sbjct: 209 GLAIAVLVIQVKDELENELKNQIKSY--TGSARNAVDDMQKTVKCCGITTYEDW 260
>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 65.7 bits (153), Expect = 3e-11
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +3
Query: 360 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY--PVX 533
CCGA+KE+ C++ TF L II E+ GY+ +E+ + +++N +I Y
Sbjct: 344 CCGAIKEHRCLLATFFALLFIILAVEITGTALGYVYRNKVEEQLGKDMNDTIVSYGEKGK 403
Query: 534 KNVXXTIDIIQTDLQCCGINSPADW 608
+ + D IQ +CCGIN DW
Sbjct: 404 EGITDAYDAIQKKEKCCGINGFKDW 428
>SB_15887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 64.1 bits (149), Expect = 9e-11
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = +3
Query: 360 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKN 539
C GA++EN C++ FSV L IIF +LA+G+ ++ +E ++ L ++T+Y +
Sbjct: 65 CIGALRENICLLKFFSVVLAIIFFLQLALGVFVFVFQDKVEAVIVEKLQTAVTKYRDNAD 124
Query: 540 VXXTIDIIQTDLQCCGINSPADW 608
+ ID +Q + +CCG DW
Sbjct: 125 LQNLIDGVQQEFKCCGAKGINDW 147
>SB_22250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 360 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY--PVX 533
C GA++EN C++ + II + G G+ LE V L +I Y P
Sbjct: 122 CIGALRENRCLLTAYIWMCGIILAGMIVCGGLGFYYKDVLETKVTAQLKDAIVLYRDPTK 181
Query: 534 KNVXXTIDIIQTDLQCCGINSPADW 608
++ ID +QT+LQCCG+ DW
Sbjct: 182 GDLHLIIDTVQTELQCCGVQGLNDW 206
>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
Length = 286
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +3
Query: 360 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKN 539
C GA+KEN + ++ +F+ + +A G+ +++ L D R L + Y +
Sbjct: 91 CVGALKENTLFLASYGIFIFCCLIPIIAAGVLAFLQREKLVDPKAR-LEDGLKSYQQDSS 149
Query: 540 VXXTIDIIQTDLQCCGINSPADW 608
ID IQT +CCGI S DW
Sbjct: 150 KQEFIDFIQTRFKCCGIESYKDW 172
>SB_22249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +3
Query: 360 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY--PVX 533
C GA++EN ++ + + + + ++ GIA YM +D V+ L + Y P
Sbjct: 100 CIGALRENTILLAIYGGAVTLCLIFLVSAGIAVYMH----QDKVVEKLKDDLKHYRDPDK 155
Query: 534 KNVXXTIDIIQTDLQCCGINSPADW 608
+N ID +QT+L+CCG+NS DW
Sbjct: 156 ENFQFLIDRLQTNLKCCGVNSYTDW 180
>SB_41644| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 252
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +3
Query: 360 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKN 539
CCGA+KE+ CM+ T+ + IF E+ + Y+ +E ++ ++ +++ +Y + +
Sbjct: 77 CCGALKESQCMLGTYFGLVTAIFCLEVTAIVLAYVYRERIEKNLHGDIRSTMNEYHLSGH 136
Query: 540 --VXXTIDIIQTDLQCCGINSPADW 608
V ID I D +CCG DW
Sbjct: 137 DAVTRAIDEIHRDFKCCGNAQYRDW 161
>SB_31427| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 299
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 360 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQY--PVX 533
C GA++EN ++ + + + + ++ G A Y+ D V+ L + Y P
Sbjct: 100 CIGALRENTILLAIYGGAVTLCLILLVSAGTAVYIHR----DKVVAKLKDDLQHYRDPDK 155
Query: 534 KNVXXTIDIIQTDLQCCGINSPADW 608
+N ID +QT+L+CCGINS DW
Sbjct: 156 ENFQFLIDRLQTNLKCCGINSYNDW 180
>SB_31428| Best HMM Match : Tetraspannin (HMM E-Value=0)
Length = 280
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +3
Query: 360 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKN 539
C GA++EN C + + + + + +A G Y + D ++ L + +Y
Sbjct: 96 CVGALRENTCFLTVYGTSVFLCLILLIACGAVAYTQK-DKVQALKERLKQDLKKYLDDPL 154
Query: 540 VXXTIDIIQTDLQCCGINSPADW 608
ID +QT L+CCG+ S DW
Sbjct: 155 NQDLIDFMQTLLKCCGVESYKDW 177
>SB_26670| Best HMM Match : Tetraspannin (HMM E-Value=1.09301e-43)
Length = 211
Score = 48.0 bits (109), Expect = 6e-06
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Frame = +3
Query: 360 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYM---KHTDLEDSVM--RNLNASITQ- 521
C GA KEN CM+ TF V LLI+ E+A + Y K++ DSV + + +T+
Sbjct: 74 CLGAWKENRCMLGTFFVLLLILLTLEIAAAVLAYNYRGKNSLNSDSVKVKDEIESDLTKA 133
Query: 522 ----YPVX--KNVXXTIDIIQTDLQCCGINSPADW 608
Y V D +Q +CCG+N DW
Sbjct: 134 LKGDYGSSGQDGVTKAFDALQEKQKCCGVNGYLDW 168
>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
Length = 919
Score = 41.9 bits (94), Expect = 4e-04
Identities = 15/71 (21%), Positives = 37/71 (52%)
Frame = +3
Query: 360 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKN 539
C +KEN +++++ + L++IF+ E+A G+ + +++ + + + +Y
Sbjct: 78 CVAVIKENRFILVSYLIMLVLIFILEIATGVVAVIYRSEISYELEVGIRGKMNRYGFTDA 137
Query: 540 VXXTIDIIQTD 572
V ID +Q +
Sbjct: 138 VTKAIDDLQKE 148
>SB_54678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +3
Query: 393 IITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKNVXXTIDIIQTD 572
I+ + V L ++F E+ G + + V + + Y ++ ID IQ++
Sbjct: 17 IVWYMVVLAVLFTLEIIAGFLSFFFVEETRSKVSSAIKLFVVHYQDDLDLQNAIDGIQSN 76
Query: 573 LQCCGINSPADW 608
L+CCG S DW
Sbjct: 77 LKCCGGYSYHDW 88
>SB_58139| Best HMM Match : Tetraspannin (HMM E-Value=0.2)
Length = 108
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/79 (21%), Positives = 39/79 (49%)
Frame = +3
Query: 372 VKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKNVXXT 551
+K ++ + + +++I + ++ G+ + ++ SV ++ I Y ++
Sbjct: 1 MKADNVFLFQYKWVIVVIVILQVLGGLLAFAFWPNVRKSVQNQISKGIVNYRDNLDLQNI 60
Query: 552 IDIIQTDLQCCGINSPADW 608
ID IQ + +CCG +S DW
Sbjct: 61 IDGIQENFKCCGSSSINDW 79
>SB_3828| Best HMM Match : Tetraspannin (HMM E-Value=6.7e-08)
Length = 542
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +3
Query: 366 GAVKENHCMIITFSVFLLIIFVAELAVGIAGYMKHTD--LEDSVMRNLNASITQYPVXKN 539
GA K+N+ ++ +V +IFV E+++G + + S + ++ Y
Sbjct: 82 GAFKQNNRVLTILAVLFFVIFVTEISLGANSLTLRNEGISKSSTSASGLQLLSIYGEHPG 141
Query: 540 VXXTIDIIQTDLQCCGINSPADWADHG 620
V ID Q CCG+ DW G
Sbjct: 142 VTEMIDNTQMGSMCCGVTDYRDWFTSG 168
>SB_32096| Best HMM Match : Tetraspannin (HMM E-Value=1.1e-13)
Length = 174
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 381 NHCMIITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYPVXKNVXXTIDI 560
N ++ T V LI +A I + + S++ +L I +P +D
Sbjct: 32 NRVLMFTGCVLALISLAGIVAAIINSKVFLIIINRSILADLKNRIKNFPGPGT--RVVDS 89
Query: 561 IQTDLQCCGINS-PADWADH 617
IQ LQCCG +S P DW ++
Sbjct: 90 IQERLQCCGADSGPNDWMNN 109
>SB_2984| Best HMM Match : Tetraspannin (HMM E-Value=9e-06)
Length = 187
Score = 32.3 bits (70), Expect = 0.34
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 396 ITFSVFLLIIFVAELAVGIAGYMKHTDLEDSVMRNLNASITQYP 527
+ F V L ++F+ EL I GY+ ++++ + L+ ++ YP
Sbjct: 130 LQFGVILGLLFLVELGTAITGYIFRSEIKTGLSDGLDTALKDYP 173
>SB_58401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 360 CCGAVKENHCMIIT 401
CCGAVKE+ CM+ T
Sbjct: 332 CCGAVKESRCMLAT 345
>SB_47590| Best HMM Match : TSP_3 (HMM E-Value=7.6e-09)
Length = 669
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 360 CCGAVKENHCMIITFS 407
CCGAVKEN C ++ S
Sbjct: 217 CCGAVKENKCFLLLVS 232
>SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08)
Length = 357
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 420 IIFVA-ELAVGIAGYMKHTDLEDSVMRNLNAS--ITQYPVXKNVXXTIDIIQTDLQCCGI 590
+IF+ E+ V + G ++ + + +N S I Y ++ +D IQ +L+CCG
Sbjct: 135 VIFITFEIIVMVFGIIQSSRVPTDTREIVNWSVFILNYQ-DDSIRDDLDSIQKNLKCCGF 193
Query: 591 NSPADW 608
DW
Sbjct: 194 KDYNDW 199
>SB_37997| Best HMM Match : Chordopox_A13L (HMM E-Value=2.1)
Length = 440
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 254 KLVSLHELHR*ELLQVRSDRSHHCRHYCFHCRVLRLLW 367
K+ LHE+ L++ S++ H R YC+ R L W
Sbjct: 56 KITKLHEIT--VFLRLTSNKEHKRRLYCYFLRTYVLFW 91
>SB_38027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 363 CGAVKENHCMIITFSVFLLIIFVAELAVGI 452
C + N C++ T+ F+LI+ VAE+ + +
Sbjct: 38 CALLYMNPCLLKTYFSFMLILVVAEVTIAV 67
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 296 QVRSDRSHHCRHYCFHCRVLRLLWRCQREPLHDNNVFSIPLDHIR 430
QV +H C+ + V+ L W ++E + D+ + SI +D I+
Sbjct: 321 QVFEPLTHLCQEHGLAFEVVDLRWGVRQESVEDHCIVSICMDEIK 365
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,014,058
Number of Sequences: 59808
Number of extensions: 299407
Number of successful extensions: 687
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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