Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_E17
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    29   0.043
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   4.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   6.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 28.7 bits (61), Expect = 0.043
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = -1

Query: 393 LYSWMRFTWTSNIDAGLILTPVSLSIRAASLSLFSCFTFITARWKAGSLAQRFSSFNFSK 214
           L+ +     T +I + L+L  V   ++  ++S FS  TF+   WK  ++      +NF++
Sbjct: 370 LFGYQTLLITFHIGSQLVLHTVKTVLKT-TMSTFSDITFMRTVWKFFNIFLITPFYNFNE 428

Query: 213 WTIQS 199
            TI S
Sbjct: 429 NTIHS 433


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 138 RGVMPLVLFWNLSGHISKKSRKIVAFKISE 49
           +G  PL + W L+GH   ++  IV  + S+
Sbjct: 629 KGDYPLNISWTLNGHFIDQTNGIVINRASK 658


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 305  LAALIERDTGVKINPASM-FDVQVKRIHEYKRQ 400
            + +LI R   VK     M FD+Q+K++  YK++
Sbjct: 1174 ICSLIHRKKIVKFLDGIMAFDIQLKQVVNYKKK 1206


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 94 HFEKVAENSGF*DFGVNGCYTIDSVRAD 11
          H E+  EN+G  D  +N    I+ +  D
Sbjct: 5  HLEQTLENAGMPDESINISDVIEVIETD 32


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +2

Query: 509 YFIAKQIIALACAVGNTVNN 568
           +++  +I +LAC + NTV++
Sbjct: 176 FYLVSKIESLACELKNTVDD 195


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 371 VKRIHEYKRQLLNILHVITLYNRIKRD 451
           V ++ +Y  QLL       +YN +KR+
Sbjct: 129 VIKLVDYHHQLLGHFGATKVYNSMKRE 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,491
Number of Sequences: 336
Number of extensions: 2929
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)