Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_E17
(642 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0026 - 31118997-31119113,31119700-31119900,31120032-311202... 210 7e-55
01_06_1361 - 36663859-36663985,36664353-36664543,36664746-366650... 208 4e-54
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 31 0.59
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 30 1.4
05_05_0334 + 24156532-24156565,24156681-24156782,24157145-241572... 29 2.4
01_01_0758 + 5843702-5843874,5844021-5844083,5844174-5844290,584... 29 2.4
11_06_0635 + 25704214-25704360,25705198-25705656 28 7.2
09_04_0515 + 18238434-18238545,18238659-18238709,18238844-182388... 28 7.2
12_02_0289 - 16914975-16916238,16916246-16916484 27 9.6
04_03_0448 - 16020773-16021066,16023040-16023291,16023470-160236... 27 9.6
04_03_0442 - 15967204-15967501,15967954-15968126,15968581-159687... 27 9.6
04_03_0441 + 15956927-15957191,15957359-15957737,15958197-159584... 27 9.6
03_05_0720 + 27114301-27114548,27114647-27114926,27115104-271151... 27 9.6
01_03_0187 + 13578641-13578674,13578822-13578870,13579026-135791... 27 9.6
>03_06_0026 - 31118997-31119113,31119700-31119900,31120032-31120218,
31120339-31120415,31120738-31120815,31120858-31120974,
31121047-31121175,31121327-31121479,31121589-31122044,
31122122-31122239,31122385-31122575,31123140-31123415,
31123524-31123700,31124040-31124141,31124227-31124459,
31125563-31125764
Length = 937
Score = 210 bits (513), Expect = 7e-55
Identities = 106/215 (49%), Positives = 143/215 (66%), Gaps = 5/215 (2%)
Frame = +2
Query: 11 VGSHAVNGVAAIHSEILKATIFRDFFEMWPDKFQNKTNGITPRRWLLLCNPGLSDLICDK 190
VG H+VNGVAAIHSEI+K +F F+EMWP KFQNKTNG+TPRRW+ CNP LS +I
Sbjct: 559 VGGHSVNGVAAIHSEIVKEDVFNSFYEMWPAKFQNKTNGVTPRRWIRFCNPELSAIISKW 618
Query: 191 IG-EDWIVHLEKLKELKRWAKDPAFQRAVMKVKQENKLKLAALIERDTGVKINPASMFDV 367
IG +DW+++ +KL ELK++A D Q K+ NK+K+ +LI TG ++P +MFDV
Sbjct: 619 IGSDDWVLNTDKLAELKKFADDEDLQSEWRAAKKANKVKVVSLIREKTGYIVSPDAMFDV 678
Query: 368 QVKRIHEYKRQLLNILHVITLYNRIK----RDPSASFTPRTVMIGGKAAPGYFIAKQIIA 535
QVKRIHEYKRQLLNIL ++ Y ++K +D SF PR AK+I+
Sbjct: 679 QVKRIHEYKRQLLNILGIVYRYKKMKEMSAKDRINSFVPR--------------AKRIVK 724
Query: 536 LACAVGNTVNNDPXVGDKLKLIFLXNYRVTLAERI 640
V TVN+DP +GD LK++F+ +Y V++AE +
Sbjct: 725 FITDVAATVNHDPEIGDLLKVVFIPDYNVSVAEAL 759
>01_06_1361 - 36663859-36663985,36664353-36664543,36664746-36665009,
36665215-36665373,36665476-36665679,36665765-36665983,
36666191-36666322,36666406-36666523,36666670-36666854,
36667263-36667355,36667819-36668008,36668500-36668585,
36668671-36668847,36669141-36669320,36669423-36669623
Length = 841
Score = 208 bits (507), Expect = 4e-54
Identities = 104/212 (49%), Positives = 137/212 (64%), Gaps = 4/212 (1%)
Frame = +2
Query: 11 VGSHAVNGVAAIHSEILKATIFRDFFEMWPDKFQNKTNGITPRRWLLLCNPGLSDLICDK 190
V +H VNGVA +HS ILK +F D+ +WP+KFQNKTNGITPRRWL CNP LS+++
Sbjct: 450 VSAHTVNGVAELHSNILKEELFADYLSIWPNKFQNKTNGITPRRWLRFCNPELSEIVTKW 509
Query: 191 IGED-WIVHLEKLKELKRWAKDPAFQRAVMKVKQENKLKLAALIERDTGVKINPASMFDV 367
+ D W +L+ L L+++A D K +K +LA + TGV I+P S+FD+
Sbjct: 510 LKTDQWTSNLDLLTGLRKFADDEKLHAEWASAKLASKKRLAKHVLDVTGVTIDPNSLFDI 569
Query: 368 QVKRIHEYKRQLLNILHVITLYNRIK---RDPSASFTPRTVMIGGKAAPGYFIAKQIIAL 538
Q+KRIHEYKRQLLNIL + Y ++K + TPRTVMIGGKA Y AK+I+ L
Sbjct: 570 QIKRIHEYKRQLLNILGAVYRYKKLKGMSAEERQKVTPRTVMIGGKAFATYTNAKRIVKL 629
Query: 539 ACAVGNTVNNDPXVGDKLKLIFLXNYRVTLAE 634
VG VNNDP V LK++F+ NY V++AE
Sbjct: 630 VNDVGAVVNNDPDVNKYLKVVFIPNYNVSVAE 661
>05_07_0112 -
27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 31.5 bits (68), Expect = 0.59
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +2
Query: 347 PASMFDVQVKRIHEYKRQLLNILHVITLYNRIKRDPSASFTPRTVMIGGKAAPG 508
P+ D V+ +H+Y +LL LHV L + IK + TP +V G A PG
Sbjct: 641 PSFTLDEFVQSLHDYDSRLLGELHVALLKSIIKDIEDVARTP-SVASGMTANPG 693
>01_06_0213 +
27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +2
Query: 359 FDVQVKRIHEYKRQLLNILHVITLYNRIKRDPSASFTPRTVMIGGKAAPGYFIAKQIIAL 538
FD V+ +H+Y +LL LH+ L + IK S TP +V + A G+ QI+
Sbjct: 386 FDEFVQSLHDYDSRLLGELHIALLKSIIKDIEDVSRTP-SVALAVNPAGGH---PQIVEG 441
Query: 539 ACAVGNTVNN 568
A A G + +
Sbjct: 442 AYAWGFNIRS 451
>05_05_0334 + 24156532-24156565,24156681-24156782,24157145-24157274,
24157361-24157445,24157525-24157666,24157762-24157894,
24157993-24158254,24158331-24158519,24158596-24158721,
24158809-24159195,24159288-24159398,24159629-24160423,
24161114-24161255,24161350-24162518,24162609-24162818,
24163010-24163478,24164037-24164464
Length = 1637
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 59 LKATIFRDFFEMWPDKFQNKTNGITPRRWLLLC 157
LK+ R++ + P++F NK + +W LLC
Sbjct: 1073 LKSLDIREYMKSMPEEFHNKEQTLKDIKWELLC 1105
>01_01_0758 +
5843702-5843874,5844021-5844083,5844174-5844290,
5847180-5847945
Length = 372
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 270 ARWKAGSLAQRFSSFNFSKWTIQSSPILSQ 181
ARW G+L S+ +S W + SP+L++
Sbjct: 178 ARWVTGTLLMLLSNVTWSLWIVLMSPLLNE 207
>11_06_0635 + 25704214-25704360,25705198-25705656
Length = 201
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 346 SRVDVRCPSEAHPRVQTSVTEYFARDHALQPHQARPQRVFHAEDCYDR 489
+++DV S+ P+V+ V E R A+ P A P H DC+ R
Sbjct: 2 AQLDVGFYSKTCPKVEEIVREEMIRILAVAPTLAGPLLRLHFHDCFVR 49
>09_04_0515 +
18238434-18238545,18238659-18238709,18238844-18238897,
18239727-18239777,18239845-18239895,18240056-18240210,
18240550-18240663,18240873-18240938,18241478-18241561,
18241640-18241726,18241975-18242066,18242163-18242223,
18242475-18242531,18243129-18243220,18243394-18243584,
18244203-18244321,18244518-18244589,18244699-18244784,
18244866-18244962,18245488-18245622
Length = 608
Score = 27.9 bits (59), Expect = 7.2
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 203 WIVHLEKLKELK--RWAK-DPAFQRAVMKVKQENKLKLAALIERDTGVKINPASMFDVQV 373
WI L K + LK +W DP F ++V N A LI+R ++++ +
Sbjct: 281 WIRFLGKEEALKLMKWNNSDPHFS---IRVNTANGYTRADLIDRLESLQVHYEKSTMDEF 337
Query: 374 KRIHEYKRQLLNILHVITL 430
RI E + LN+ HV T+
Sbjct: 338 VRIQEGMQNYLNLFHVQTV 356
>12_02_0289 - 16914975-16916238,16916246-16916484
Length = 500
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 379 HPRVQTSVTEYFARDHALQPHQARPQR 459
+P Q +V+EY A +HA++ H P++
Sbjct: 49 NPYEQITVSEYIATEHAVRRHLCLPEK 75
>04_03_0448 -
16020773-16021066,16023040-16023291,16023470-16023605,
16023713-16023937,16024467-16024851,16025142-16025421
Length = 523
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 209 VHLEKLKELKRWAKD 253
VHL++LKE+ RW KD
Sbjct: 212 VHLKELKEISRWWKD 226
>04_03_0442 -
15967204-15967501,15967954-15968126,15968581-15968716,
15969064-15969288,15969792-15970053,15970062-15970169,
15970337-15970595,15971188-15971199
Length = 490
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 209 VHLEKLKELKRWAKD 253
VHL++LKE+ RW KD
Sbjct: 204 VHLKELKEISRWWKD 218
>04_03_0441 +
15956927-15957191,15957359-15957737,15958197-15958421,
15958549-15958684,15960559-15960810,15961585-15961881
Length = 517
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 209 VHLEKLKELKRWAKD 253
VHL++LKE+ RW KD
Sbjct: 205 VHLKELKEISRWWKD 219
>03_05_0720 +
27114301-27114548,27114647-27114926,27115104-27115154,
27115679-27116000,27116610-27116718,27116754-27116802
Length = 352
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -1
Query: 249 LAQRFSSFNFSKWTIQSSPILSQMRS 172
LA +SSFN ++W+ ++ +L Q RS
Sbjct: 304 LALEYSSFNQTRWSFINTSLLEQARS 329
>01_03_0187 +
13578641-13578674,13578822-13578870,13579026-13579177,
13579634-13579657,13580589-13580674,13580789-13580867,
13581362-13581465
Length = 175
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 454 QRVFHAEDCYDRWQSRSWILHR 519
QRVF AE C W++RS L R
Sbjct: 16 QRVFEAEGCSAHWRNRSESLSR 37
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,089,078
Number of Sequences: 37544
Number of extensions: 342844
Number of successful extensions: 1007
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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