Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_E17
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            26   0.88 
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    24   3.6  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    23   6.2  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   6.2  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -3

Query: 493 ATDHNSPRRERRAGVALD 440
           A  H+ PR ++RAGVALD
Sbjct: 347 ARAHHLPRSDQRAGVALD 364


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 245 AKDPAFQRAVMKVKQENKLKLAALIERDTGVKINPA 352
           +K+P F   V++     + KLA ++ R   V++ PA
Sbjct: 54  SKEPRFILRVLRSLPTTRRKLALVVVRSLAVQLYPA 89


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 59  LKATIFRDFFEMWPDKFQNKTNGITPRRWLLLCNPG-LSDLICDK 190
           ++A  F+DF +   D   N    I  RR L    PG L  LI D+
Sbjct: 11  MQAPEFKDFAKEMVDYISNYLENIRDRRVLPTVQPGYLRPLIPDE 55


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 59  LKATIFRDFFEMWPDKFQNKTNGITPRRWLLLCNPG-LSDLICDK 190
           ++A  F+DF +   D   N    I  RR L    PG L  LI D+
Sbjct: 42  MQAPEFKDFAKEMVDYISNYLENIRDRRVLPTVQPGYLRPLIPDE 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,630
Number of Sequences: 2352
Number of extensions: 12899
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)