Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_E17
         (642 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical pr...   286   8e-78
U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical pr...   286   8e-78
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr...    31   0.70 
Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical pr...    28   4.9  

>U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical protein
            T22F3.3b protein.
          Length = 846

 Score =  286 bits (702), Expect = 8e-78
 Identities = 131/210 (62%), Positives = 166/210 (79%)
 Frame = +2

Query: 11   VGSHAVNGVAAIHSEILKATIFRDFFEMWPDKFQNKTNGITPRRWLLLCNPGLSDLICDK 190
            V SHA+NGVAA+HS++LK++ FRDF+E +PD+FQNKTNGITPRRWLLL NP L+DLI +K
Sbjct: 449  VASHAINGVAALHSDLLKSSTFRDFYEFYPDRFQNKTNGITPRRWLLLSNPSLADLIVEK 508

Query: 191  IGEDWIVHLEKLKELKRWAKDPAFQRAVMKVKQENKLKLAALIERDTGVKINPASMFDVQ 370
            IGE WI +L++L++LK +A D  F  ++ +VK ENK ++A  +  +  V +N AS+FDV 
Sbjct: 509  IGESWITNLDELQKLKEYANDAGFLDSIRRVKLENKQQVAQYLSDEYNVNVNAASLFDVH 568

Query: 371  VKRIHEYKRQLLNILHVITLYNRIKRDPSASFTPRTVMIGGKAAPGYFIAKQIIALACAV 550
            VKRIHEYKRQLLNILHVI LYNRIK +P+     RTV+ GGKAAPGY +AKQII L  AV
Sbjct: 569  VKRIHEYKRQLLNILHVIALYNRIKENPNIDMVKRTVLYGGKAAPGYHMAKQIIRLITAV 628

Query: 551  GNTVNNDPXVGDKLKLIFLXNYRVTLAERI 640
               VNND  VGD+LK+IFL NYRV++AE+I
Sbjct: 629  AEQVNNDAIVGDRLKVIFLENYRVSMAEKI 658


>U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical protein
            T22F3.3a protein.
          Length = 882

 Score =  286 bits (702), Expect = 8e-78
 Identities = 131/210 (62%), Positives = 166/210 (79%)
 Frame = +2

Query: 11   VGSHAVNGVAAIHSEILKATIFRDFFEMWPDKFQNKTNGITPRRWLLLCNPGLSDLICDK 190
            V SHA+NGVAA+HS++LK++ FRDF+E +PD+FQNKTNGITPRRWLLL NP L+DLI +K
Sbjct: 485  VASHAINGVAALHSDLLKSSTFRDFYEFYPDRFQNKTNGITPRRWLLLSNPSLADLIVEK 544

Query: 191  IGEDWIVHLEKLKELKRWAKDPAFQRAVMKVKQENKLKLAALIERDTGVKINPASMFDVQ 370
            IGE WI +L++L++LK +A D  F  ++ +VK ENK ++A  +  +  V +N AS+FDV 
Sbjct: 545  IGESWITNLDELQKLKEYANDAGFLDSIRRVKLENKQQVAQYLSDEYNVNVNAASLFDVH 604

Query: 371  VKRIHEYKRQLLNILHVITLYNRIKRDPSASFTPRTVMIGGKAAPGYFIAKQIIALACAV 550
            VKRIHEYKRQLLNILHVI LYNRIK +P+     RTV+ GGKAAPGY +AKQII L  AV
Sbjct: 605  VKRIHEYKRQLLNILHVIALYNRIKENPNIDMVKRTVLYGGKAAPGYHMAKQIIRLITAV 664

Query: 551  GNTVNNDPXVGDKLKLIFLXNYRVTLAERI 640
               VNND  VGD+LK+IFL NYRV++AE+I
Sbjct: 665  AEQVNNDAIVGDRLKVIFLENYRVSMAEKI 694


>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical
           protein B0240.3 protein.
          Length = 1093

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -3

Query: 445 LDAVVKRDHVQNIQ*LTFVLVDAL-HLDIEHRRGINFNSGIPFNKG 311
           L  V+++DHV++I  +  +  D L H +I HR G   N    FN G
Sbjct: 838 LPVVMEKDHVKSICMIALLQRDCLHHFEIPHRPGTFLNCRWGFNSG 883


>Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical
           protein K09C8.4 protein.
          Length = 633

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 227 KELKRWAKDPAFQRAVMKVKQENKLKLAA 313
           K LKRW +DP +Q+ +  +K +   K A+
Sbjct: 598 KSLKRWRRDPHYQKCLHTLKNKFMKKTAS 626


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,184,884
Number of Sequences: 27780
Number of extensions: 282628
Number of successful extensions: 713
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)