BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_E17 (642 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 3.3 AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 23 3.3 AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 22 4.4 >DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine receptor alpha3subunit protein. Length = 566 Score = 22.6 bits (46), Expect = 3.3 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = -3 Query: 589 LVTYVWVVVHSISNCTG*SD--NLFGDEVS 506 LV +W+V+ IS C+G D L+ D +S Sbjct: 5 LVGIMWIVLVLISGCSGNPDAKRLYDDLLS 34 >AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like protein protein. Length = 130 Score = 22.6 bits (46), Expect = 3.3 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +2 Query: 215 LEKLKELKRWAKDPAFQRAVMKVKQE 292 LEKLKE + W D + +++K + E Sbjct: 105 LEKLKERRIWRDDALTKLSLLKKRIE 130 >AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc finger domain-Z1 isoform protein. Length = 111 Score = 22.2 bits (45), Expect = 4.4 Identities = 11/29 (37%), Positives = 17/29 (58%) Frame = +1 Query: 7 ICRLSRCQWCSSHSLRNLKSHYFPRLFRN 93 IC + + + S +SLRN KS Y + +N Sbjct: 34 ICNICKRVYSSLNSLRNHKSIYHRQHSKN 62 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 172,089 Number of Sequences: 438 Number of extensions: 3506 Number of successful extensions: 5 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19315974 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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