Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_E14
         (656 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0351 + 2790469-2790534,2791089-2791173,2791921-2792021,279...    30   1.9  
12_02_0535 + 20117205-20117401,20118556-20118628,20118725-201187...    29   3.3  
05_03_0368 - 13127536-13128429                                         28   5.7  
01_05_0147 + 18597194-18597643,18598347-18598681,18600073-186001...    28   5.7  
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183...    28   7.5  
03_05_0459 + 24533233-24533278,24533881-24534167,24534287-245345...    27   9.9  

>01_01_0351 +
           2790469-2790534,2791089-2791173,2791921-2792021,
           2792601-2792683,2792829-2792874,2792969-2793025,
           2793118-2793172,2793244-2793344,2793432-2793495,
           2793604-2793737,2794158-2794346
          Length = 326

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 219 LLXN*YVKLFKAPLELKSLVRQVGLKPLLKKPTNVFW 329
           +L N +VKLF+ PL+ K +  +     L++  TNVFW
Sbjct: 77  ILANHFVKLFEVPLDGKEVSLRYS-SALVQGATNVFW 112


>12_02_0535 +
           20117205-20117401,20118556-20118628,20118725-20118787,
           20119167-20119220,20119303-20119359,20119615-20119707
          Length = 178

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +2

Query: 353 GSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRK 457
           G ++ H KS R S KS  RER  +    +DKSK K
Sbjct: 77  GKSRKHKKS-RSSRKSRERERSKDRHSKRDKSKHK 110


>05_03_0368 - 13127536-13128429
          Length = 297

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 383 RRSHKSPTRERRSESSIHKDKSKRKR 460
           RRS +  ++ RRS S   K KS+RKR
Sbjct: 203 RRSSRGRSKHRRSSSKEDKKKSRRKR 228


>01_05_0147 +
           18597194-18597643,18598347-18598681,18600073-18600147,
           18600325-18600427,18601554-18601642,18602953-18603064,
           18604093-18604146,18604271-18604319,18606236-18606347,
           18606389-18606436,18607000-18607327
          Length = 584

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +2

Query: 293 KAPPQKTNKRFLVNTIRNAXGSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
           ++P +++  R   +  R A  S++ H   H   HKS  R RRS     + + +R+R
Sbjct: 49  RSPDRRSRSRSSGSKRRKASSSSRRHRHHH---HKSSGRSRRSRDDDDERRRRRRR 101


>12_02_1280 -
           27517683-27517871,27517955-27518029,27518155-27518318,
           27518424-27518538,27518783-27519074,27519162-27519318,
           27519438-27519510,27520309-27520377,27520471-27520694,
           27520800-27520981,27521067-27522064,27522335-27522580
          Length = 927

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 377 SHRRSHKSPTRERRSESSIHKDKSKRKR 460
           +H    +S   ERRS SS HKD  +R R
Sbjct: 296 AHHIRDESRESERRSSSSRHKDNERRDR 323


>03_05_0459 +
           24533233-24533278,24533881-24534167,24534287-24534568,
           24534628-24534682,24534895-24534935,24537484-24537549
          Length = 258

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 374 KSHRRSHKSPTRERRSESSIHKDKSKRK 457
           K H+  HK  ++++  E    K+K K+K
Sbjct: 149 KKHKHRHKDRSKDKEKEKEKEKEKEKKK 176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,457,008
Number of Sequences: 37544
Number of extensions: 217319
Number of successful extensions: 455
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)