Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_E14
(656 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL138971-4|CAB72282.1| 302|Drosophila melanogaster EG:BACR43E12... 31 1.4
AL132651-1|CAB65880.1| 1032|Drosophila melanogaster EG:BACR7A4.1... 31 1.4
AL109630-17|CAB65879.1| 1032|Drosophila melanogaster EG:BACR7A4.... 31 1.4
AE014298-470|AAF45830.1| 327|Drosophila melanogaster CG14418-PA... 31 1.4
AY069568-1|AAL39713.1| 513|Drosophila melanogaster LD29830p pro... 30 3.2
AF055719-1|AAC32822.3| 513|Drosophila melanogaster splicing fac... 30 3.2
AE014134-1720|AAF52825.1| 513|Drosophila melanogaster CG4602-PA... 30 3.2
X06589-2|CAA29813.1| 964|Drosophila melanogaster su(wa) protein... 29 4.2
X06589-1|CAA29812.1| 1042|Drosophila melanogaster su(wa) protein... 29 4.2
AY118635-1|AAM50004.1| 964|Drosophila melanogaster SD01276p pro... 29 4.2
AE014298-146|AAG22382.2| 963|Drosophila melanogaster CG3019-PA,... 29 4.2
AE014298-145|ABI30963.1| 927|Drosophila melanogaster CG3019-PF,... 29 4.2
AY061353-1|AAL28901.1| 687|Drosophila melanogaster LD28117p pro... 29 5.6
AE014298-2173|AAF48473.2| 687|Drosophila melanogaster CG9213-PA... 29 5.6
AY070586-1|AAL48057.1| 421|Drosophila melanogaster RE68879p pro... 28 9.7
>AL138971-4|CAB72282.1| 302|Drosophila melanogaster EG:BACR43E12.5
protein.
Length = 302
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 314 NKRFLVNTIRNAXGSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
N+R L N N+ +NK + HRR + R RR +I++ + +++R
Sbjct: 249 NRRRLNNN--NSNNNNKQRQQQHRRQQQQQQRRRRPNRNINRQQQQQRR 295
>AL132651-1|CAB65880.1| 1032|Drosophila melanogaster
EG:BACR7A4.10,FBgn0003638;su(w[a]) protein.
Length = 1032
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 344 NAXGSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
+A S+ H K+HRRS R S+SS +S R+R
Sbjct: 895 SARSSSSRHLKTHRRSRSRSKNVRSSDSSPSSRESSRRR 933
>AL109630-17|CAB65879.1| 1032|Drosophila melanogaster
EG:BACR7A4.10,FBgn0003638;su(w[a]) protein.
Length = 1032
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 344 NAXGSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
+A S+ H K+HRRS R S+SS +S R+R
Sbjct: 895 SARSSSSRHLKTHRRSRSRSKNVRSSDSSPSSRESSRRR 933
>AE014298-470|AAF45830.1| 327|Drosophila melanogaster CG14418-PA
protein.
Length = 327
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 314 NKRFLVNTIRNAXGSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
N+R L N N+ +NK + HRR + R RR +I++ + +++R
Sbjct: 274 NRRRLNNN--NSNNNNKQRQQQHRRQQQQQQRRRRPNRNINRQQQQQRR 320
>AY069568-1|AAL39713.1| 513|Drosophila melanogaster LD29830p
protein.
Length = 513
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 341 RNAXGSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRK 457
R S + S RRS +S +RERRS S + +S+ K
Sbjct: 296 RRTSRSRSHRSTSRRRSRRSGSRERRSVSRSRRSRSRGK 334
>AF055719-1|AAC32822.3| 513|Drosophila melanogaster splicing factor
SRp54 protein.
Length = 513
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 341 RNAXGSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRK 457
R S + S RRS +S +RERRS S + +S+ K
Sbjct: 296 RRTSRSRSHRSTSRRRSRRSGSRERRSVSRSRRSRSRGK 334
>AE014134-1720|AAF52825.1| 513|Drosophila melanogaster CG4602-PA
protein.
Length = 513
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 341 RNAXGSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRK 457
R S + S RRS +S +RERRS S + +S+ K
Sbjct: 296 RRTSRSRSHRSTSRRRSRRSGSRERRSVSRSRRSRSRGK 334
>X06589-2|CAA29813.1| 964|Drosophila melanogaster su(wa) protein
protein.
Length = 964
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 356 SNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
S+ H K+HRRS R S+SS +S R+R
Sbjct: 831 SSSRHLKTHRRSRSRSKNVRSSDSSPSSRESSRRR 865
>X06589-1|CAA29812.1| 1042|Drosophila melanogaster su(wa) protein
protein.
Length = 1042
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 356 SNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
S+ H K+HRRS R S+SS +S R+R
Sbjct: 909 SSSRHLKTHRRSRSRSKNVRSSDSSPSSRESSRRR 943
>AY118635-1|AAM50004.1| 964|Drosophila melanogaster SD01276p
protein.
Length = 964
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 356 SNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
S+ H K+HRRS R S+SS +S R+R
Sbjct: 831 SSSRHLKTHRRSRSRSKNVRSSDSSPSSRESSRRR 865
>AE014298-146|AAG22382.2| 963|Drosophila melanogaster CG3019-PA,
isoform A protein.
Length = 963
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 356 SNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
S+ H K+HRRS R S+SS +S R+R
Sbjct: 830 SSSRHLKTHRRSRSRSKNVRSSDSSPSSRESSRRR 864
>AE014298-145|ABI30963.1| 927|Drosophila melanogaster CG3019-PF,
isoform F protein.
Length = 927
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 356 SNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
S+ H K+HRRS R S+SS +S R+R
Sbjct: 810 SSSRHLKTHRRSRSRSKNVRSSDSSPSSRESSRRR 844
>AY061353-1|AAL28901.1| 687|Drosophila melanogaster LD28117p
protein.
Length = 687
Score = 29.1 bits (62), Expect = 5.6
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 290 VKAPPQKTNKRFLVNTIRNAXGSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
++ P +K+ K + R+ S+K K HR S S S SS +D+ +RKR
Sbjct: 61 LEKPAKKSKKNVSKHKSRSKSKSSKKSRK-HRNSSSSSESSTSSSSSFSEDEKERKR 116
>AE014298-2173|AAF48473.2| 687|Drosophila melanogaster CG9213-PA
protein.
Length = 687
Score = 29.1 bits (62), Expect = 5.6
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +2
Query: 290 VKAPPQKTNKRFLVNTIRNAXGSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
++ P +K+ K + R+ S+K K HR S S S SS +D+ +RKR
Sbjct: 61 LEKPAKKSKKNVSKHKSRSKSKSSKKSRK-HRNSSSSSESSTSSSSSFSEDEKERKR 116
>AY070586-1|AAL48057.1| 421|Drosophila melanogaster RE68879p
protein.
Length = 421
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 359 NKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
+K+ SH++ TR+RR+ S +++S+R+R
Sbjct: 100 SKWDSPERSNSHRNSTRQRRNTRSRSRERSERER 133
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,213,008
Number of Sequences: 53049
Number of extensions: 391279
Number of successful extensions: 1126
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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