Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_E14
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70851-6|ABC48246.1|  108|Caenorhabditis elegans Hypothetical pr...    33   0.24 
AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical...    32   0.41 
AC025716-14|AAK39603.1|  227|Caenorhabditis elegans Hypothetical...    29   2.9  
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z70204-3|CAA94113.1|  385|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AF125442-4|AAD12794.1|  317|Caenorhabditis elegans Serpentine re...    27   8.9  
AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical...    27   8.9  

>U70851-6|ABC48246.1|  108|Caenorhabditis elegans Hypothetical
           protein M02B7.7 protein.
          Length = 108

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +2

Query: 218 AVEXLIREAVQGAARAEIVGPSGWVKAPPQKTNKRFLVNTIRN 346
           A + ++ EA +   RA+ +GP G++K     TNK FL  TI +
Sbjct: 55  AKKAILFEAKRAKERADEMGPQGYLKPKSLGTNKEFLRRTIES 97


>AL117195-12|CAB60765.1|  425|Caenorhabditis elegans Hypothetical
           protein Y57A10A.19 protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
 Frame = +2

Query: 260 RAEIVGPSGWVKAPPQKTNKRFLVNTIRNAXGSNKYHFKSHRRSHKSPTRERRSESSIH- 436
           ++++VG +      PQK +K  L+ T+R    S K    S   S  S + E  SE   H 
Sbjct: 152 KSDVVG-AAMESELPQKDDKEKLLETLRLHRKSKKKQESSSSSSSSSSSSESSSEDEKHR 210

Query: 437 KDKSKRKR 460
           KD+ K+++
Sbjct: 211 KDRKKKEK 218


>AC025716-14|AAK39603.1|  227|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.16 protein.
          Length = 227

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = +2

Query: 140 KIMTDKEDVDNKPENVPIXDEALXKLAVEXLIREAVQGAARAEIVGPSGWVKAPP 304
           K  ++K +V+ KPE  P+ DEA  K   E   +  V+  A A    P+    APP
Sbjct: 131 KASSEKPEVEKKPEEPPVEDEA--KTPPE---KPKVEEPAPAPAPAPAAVAPAPP 180


>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
           protein F36F2.3a protein.
          Length = 1128

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +2

Query: 305 QKTNKRFLVNTIRNAXGSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRKR 460
           +K ++   +NT      S+K   K H++S K+    R+ E     ++ KRK+
Sbjct: 746 EKESQSSTINTADEDDESSK-KMKKHKKSKKNKKHHRKEEDGDEDEERKRKK 796


>Z70204-3|CAA94113.1|  385|Caenorhabditis elegans Hypothetical
           protein C11G6.3 protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 8/38 (21%), Positives = 20/38 (52%)
 Frame = +2

Query: 344 NAXGSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRK 457
           ++  S+K+H   H++  K    ++  +   H+D+ K +
Sbjct: 109 SSSSSSKHHHHHHKKERKDKEHKKHKKDREHRDREKER 146


>AF125442-4|AAD12794.1|  317|Caenorhabditis elegans Serpentine
           receptor, class v protein21 protein.
          Length = 317

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 26/89 (29%), Positives = 38/89 (42%)
 Frame = -2

Query: 436 VNRRFRTSLSCWRLMRAAVALKMIFIGSXCISYGIHQKTFVGFLRRGFNPT*RTNDFSSS 257
           V   F+  LS    +   +   +IFI S C +  I    FV  +RR F PT     + + 
Sbjct: 229 VRLAFQVLLSFLAKLVMMIYFLLIFITSLCSAGTIRDMVFVVAVRRNF-PT----AYGTL 283

Query: 256 GALNSFTYQXFNSQLX*GFVXYRNIFRFI 170
             +  FT   FN+ +      YRN+ R I
Sbjct: 284 SFIGPFTILIFNNDV------YRNVRRMI 306


>AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5a protein.
          Length = 571

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +2

Query: 302 PQKTNKRFLVNTIRNAXGSNKYHFKSHRRSHKSPTRERRSESSIHKDKSKRK 457
           P+K +K  +V +  ++ G+      S  R H+S  R R +     K+K   K
Sbjct: 79  PEKESKDAVVTSTGSSRGATSASVTSSSRRHESGERHRETHRREDKEKKPEK 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,348,563
Number of Sequences: 27780
Number of extensions: 218133
Number of successful extensions: 600
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)