Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_E11
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.41 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +2

Query: 257 NTNVLRQPTITREMNRQHSNGPRPP*KS*XWRSGKSVKASTTQPSSVNCTS 409
           + N+L   + TR+ ++Q+   P P  +S    +  S K  TT P S N +S
Sbjct: 676 SNNILPPESPTRDKSKQNEKSPSPQQRS-PSVTDLSTKDGTTVPESNNGSS 725


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 144 LDHGENKK*SQESTNFRAQHDHDRLRV 64
           L H +     Q   N  +  DHDRLR+
Sbjct: 136 LGHLQTDLMGQSIFNITSPDDHDRLRM 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,272
Number of Sequences: 336
Number of extensions: 2519
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)