BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_E11 (654 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 35 0.009 SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 33 0.027 SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 30 0.25 SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 1.0 SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 27 2.4 SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 4.1 SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 26 5.5 SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 26 5.5 SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces pombe... 25 7.2 SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.2 SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces p... 25 7.2 SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizos... 25 7.2 SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 25 9.5 >SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosaccharomyces pombe|chr 1|||Manual Length = 741 Score = 35.1 bits (77), Expect = 0.009 Identities = 25/109 (22%), Positives = 50/109 (45%) Frame = +1 Query: 253 LKHKRSTPTNNYERNEQATLQWAKTSMKELXMEIREIGESVNNSALLRQLHIIRNELKQA 432 LK TP N+ + Q + A + +KEL E++ +S + L + L I RN+ Sbjct: 589 LKSGLPTPANDLQNKSQNNERKASSQVKEL--EVKNYSKSTD--LLKKTLRIPRNDEPLE 644 Query: 433 LTETSDLAQLARTQEARLHKMDNEVGRLKYEGQQMRSTVAELRTHVQQA 579 DL +++ Q++ + NE+ + K + ++ + + HV + Sbjct: 645 AANQFDLLKVSPQQKSEVPPKRNELSQSKLKNRKKKENSETNKNHVDMS 693 >SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces pombe|chr 1|||Manual Length = 1957 Score = 33.5 bits (73), Expect = 0.027 Identities = 27/151 (17%), Positives = 71/151 (47%), Gaps = 5/151 (3%) Frame = +1 Query: 139 IKAELRFKEELQAVAEQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQW 318 + E+R KE++ E + I L++ + +S + + K++ ++ R + ++ Sbjct: 1402 LNQEIRLKEDVLKEKESLIISLEESLSNQRQKESSLLDAKNELEHMLDDTSRKNSSLMEK 1461 Query: 319 AKTSMKELXMEIREIGESVNNSALLRQLHIIRNELKQAL-TETSDLAQLARTQEARLHKM 495 ++ L + E+ +V L++LH L + + ++ + + + E+ + ++ Sbjct: 1462 IESINSSLDDKSFELASAVEKLGALQKLHSESLSLMENIKSQLQEAKEKIQVDESTIQEL 1521 Query: 496 DNEVGRLK--YEGQ--QMRSTVAELRTHVQQ 576 D+E+ K YEG+ S + +L +++Q Sbjct: 1522 DHEITASKNNYEGKLNDKDSIIRDLSENIEQ 1552 >SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces pombe|chr 3|||Manual Length = 1115 Score = 30.3 bits (65), Expect = 0.25 Identities = 28/140 (20%), Positives = 62/140 (44%) Frame = +1 Query: 136 VIKAELRFKEELQAVAEQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQ 315 +++ E +++E++ + E VE +IT+ + +E+ K S +++YE Sbjct: 523 LMRMEQQWREDVDQLQEYVE--------EITQELQDTKEVLSKSSKESDDYEEVVGKLRT 574 Query: 316 WAKTSMKELXMEIREIGESVNNSALLRQLHIIRNELKQALTETSDLAQLARTQEARLHKM 495 A+ +++ IRE ES+ S ++ + +E+ Q +D + RL + Sbjct: 575 EAEREIEKFEKTIRENEESI--SLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTL 632 Query: 496 DNEVGRLKYEGQQMRSTVAE 555 + E + K + S + E Sbjct: 633 EEENNKAKEDSTSKTSNLLE 652 Score = 27.5 bits (58), Expect = 1.8 Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 1/138 (0%) Frame = +1 Query: 154 RFKEELQAVAEQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQWAKTSM 333 R +EL ++ +++ + + L+ + LKSEIEE ++ T N++ + A ++ + Sbjct: 730 RHNDELDSLNKKLREFEGI-LSSNSSLKSEIEERNNQYVTLRENFDSLQNAIMETFDKQV 788 Query: 334 KELXMEIREIGESVNNSALLRQLHIIRNELKQALTETSDLAQLARTQEARLHKMDNEVGR 513 SVN+ L++Q+ +++E K+ + T L + E L + N + Sbjct: 789 THC---------SVNH--LVQQIRKLKDENKKDQSGTDKLMKKIYHCEQSLKEKTNSLET 837 Query: 514 LKYEGQQMRSTV-AELRT 564 L E +++++ + AE R+ Sbjct: 838 LVSEKKELKNLLDAERRS 855 >SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1727 Score = 28.3 bits (60), Expect = 1.0 Identities = 27/96 (28%), Positives = 43/96 (44%) Frame = +1 Query: 154 RFKEELQAVAEQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQWAKTSM 333 R K EL + +E + +I LKSE+E +K K S N Q+ ++ + Sbjct: 1321 RLKNELVSKENLIEELNQ----EIGHLKSELETVKSK-SEDLENERAQNQSKIEQLELKN 1375 Query: 334 KELXMEIREIGESVNNSALLRQLHIIRNELKQALTE 441 +L R E V N +L + + IR +L Q +E Sbjct: 1376 TKLAAAWRTKYEQVVNKSLEKH-NQIRQQLSQKTSE 1410 >SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharomyces pombe|chr 1|||Manual Length = 969 Score = 27.1 bits (57), Expect = 2.4 Identities = 18/68 (26%), Positives = 33/68 (48%) Frame = +1 Query: 136 VIKAELRFKEELQAVAEQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQ 315 +++AE KEE + + VE+MKTLH ++ + I L N ++ + Sbjct: 872 LLEAEKIEKEE-EKIERVVEVMKTLHPAHLSVFRFLIAHLGRVCKHAEKNLMNSKNVSTV 930 Query: 316 WAKTSMKE 339 +A T M++ Sbjct: 931 FAPTLMRD 938 >SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 206 Score = 26.2 bits (55), Expect = 4.1 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = -1 Query: 225 NVSKVQSFHDLDLFSDGLQLFLEPQLGLDHGENKK*SQESTNFRAQHD 82 N+S ++ D+D F + + P + D GEN S S+ +++D Sbjct: 138 NISHAEAEEDIDSFLESMDQSAPPSITEDKGENYISSNHSSMHISRND 185 >SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schizosaccharomyces pombe|chr 2|||Manual Length = 689 Score = 25.8 bits (54), Expect = 5.5 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Frame = +1 Query: 118 LFLVFTVIKAELRFKEELQAVAEQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERN 297 LF V E +E++ + + ++ L +T + S L+H RS PT YER Sbjct: 482 LFQVKEKTNIEAFLREQIITLESSIATLRQ-ELAQVTEINS-CRVLQH-RSNPTLKYERI 538 Query: 298 EQATLQW--AKTSMKELXMEIREI 363 + A L+ A+ S + +E +++ Sbjct: 539 KAAQLEMLNAENSALKALLEDKKV 562 >SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schizosaccharomyces pombe|chr 2|||Manual Length = 809 Score = 25.8 bits (54), Expect = 5.5 Identities = 14/51 (27%), Positives = 23/51 (45%) Frame = +3 Query: 387 PPPSTAHHT**AKASPYRDLGLSATCSHSRSQATQDGQ*SWQAQIRRTTDE 539 PP T A + +R ++ TCS + S D + ++A + RT E Sbjct: 202 PPLDIVEKTLEAPSPNFRIKRVTFTCSSNSSDDEMDSENDYEAMVNRTVAE 252 >SPAC20G4.05c |||UPF0061 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 568 Score = 25.4 bits (53), Expect = 7.2 Identities = 13/54 (24%), Positives = 27/54 (50%) Frame = +1 Query: 292 RNEQATLQWAKTSMKELXMEIREIGESVNNSALLRQLHIIRNELKQALTETSDL 453 RN+ + W + + +E+ + V++ + QLH + LK+A TS++ Sbjct: 325 RNQPDIIIWNLSKLASALVELIGACDKVDDLQYMEQLHNSTDLLKKAFAYTSEV 378 >SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual Length = 723 Score = 25.4 bits (53), Expect = 7.2 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +3 Query: 81 DHVVPENLWTLDFISCFHRDQGRVEV 158 +H PENLW L + S FH + V Sbjct: 223 EHQTPENLWRLPY-SSFHSKNSHLVV 247 >SPAC2F7.17 |||peptide chain release factor|Schizosaccharomyces pombe|chr 1|||Manual Length = 396 Score = 25.4 bits (53), Expect = 7.2 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = +1 Query: 397 QLHIIRNELKQALTETSDLAQLARTQEARLHKMDNEVGRLKYEGQQM 537 Q H + N+ + A+T +DLA+ + ARL ++ N + K +Q+ Sbjct: 50 QFHQVNNKDQSAMTNDTDLAK----RIARLRRVHNAYSKFKSLSEQI 92 >SPCC338.07c |||NatA N-acetyltransferase complex subunit |Schizosaccharomyces pombe|chr 3|||Manual Length = 729 Score = 25.4 bits (53), Expect = 7.2 Identities = 12/25 (48%), Positives = 20/25 (80%), Gaps = 2/25 (8%) Frame = +1 Query: 376 NNSALLRQLHIIRNELKQ--ALTET 444 NNS+LLR L +++++L+Q AL +T Sbjct: 110 NNSSLLRDLALLQSQLRQYKALADT 134 >SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|Schizosaccharomyces pombe|chr 2|||Manual Length = 403 Score = 25.0 bits (52), Expect = 9.5 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = +1 Query: 1 DSSPELWSRQTTRRSRVFTRNNSKSIVIMLCPKICGLLTLFLV 129 D SP++ ++ RV RN+S ++ +L K+ L++L +V Sbjct: 94 DISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMV 136 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,444,492 Number of Sequences: 5004 Number of extensions: 45741 Number of successful extensions: 138 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 137 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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