Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_E11
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee homeobox-...    25   0.48 
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    23   3.4  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   4.5  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   4.5  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   4.5  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   4.5  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   4.5  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   4.5  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   4.5  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   4.5  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   6.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.9  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   7.9  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   7.9  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   7.9  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   7.9  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    21   7.9  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   7.9  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    21   7.9  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   7.9  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   7.9  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   7.9  

>M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H17. ).
          Length = 79

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 115 TLFLVFTVIKAELRFKE-ELQAVAEQVEIMKTLHLTDITRLK 237
           T F    ++  E +F+E +   +AE+ E   +LHLT+ T++K
Sbjct: 14  TPFTTQQLLSLEKKFREKQYLTIAERAEFSSSLHLTE-TQVK 54


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 184 EQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQWAKT 327
           E   +MK + L    R   EIE+L  +RS   +   R+  +T   +KT
Sbjct: 52  EHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSSTSNTSKT 99


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 412 RNELKQALTETSDLAQLARTQEARLHKMDNEVGRLK 519
           R E+K  L +T+++ +        + K +NE    K
Sbjct: 173 REEIKNILNKTNEITEHRTVLAVNIEKSENETKTCK 208


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 412 RNELKQALTETSDLAQLARTQEARLHKMDNEVGRLK 519
           R E+K  L +T+++ +        + K +NE    K
Sbjct: 173 REEIKNILNKTNEITEHRTVLAVNIEKSENETKTCK 208


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 412 RNELKQALTETSDLAQLARTQEARLHKMDNEVGRLK 519
           R E+K  L +T+++ +        + K +NE    K
Sbjct: 173 REEIKNILNKTNEITEHRTVLAVNIEKSENETKTCK 208


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 412 RNELKQALTETSDLAQLARTQEARLHKMDNEVGRLK 519
           R E+K  L +T+++ +        + K +NE    K
Sbjct: 173 REEIKNILNKTNEITEHRTVLAVNIEKSENETKTCK 208


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 412 RNELKQALTETSDLAQLARTQEARLHKMDNEVGRLK 519
           R E+K  L +T+++ +        + K +NE    K
Sbjct: 173 REEIKNILNKTNEITEHRTVLAVNIEKSENETKTCK 208


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 412 RNELKQALTETSDLAQLARTQEARLHKMDNEVGRLK 519
           R E+K  L +T+++ +        + K +NE    K
Sbjct: 173 REEIKNILNKTNEITEHRTVLAVNIEKSENETKTCK 208


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 412 RNELKQALTETSDLAQLARTQEARLHKMDNEVGRLK 519
           R E+K  L +T+++ +        + K +NE    K
Sbjct: 173 REEIKNILNKTNEITEHRTVLAVNIEKSENETKTCK 208


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 412 RNELKQALTETSDLAQLARTQEARLHKMDNEVGRLK 519
           R E+K  L +T+++ +        + K +NE    K
Sbjct: 173 REEIKNILNKTNEITEHRTVLAVNIEKSENETKTCK 208


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +1

Query: 184 EQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQWAKT 327
           E   +MK + L    R   EIE+L  +RS   +   R++  T   +KT
Sbjct: 52  EHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDKSNTSNTSKT 99


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 198 DLDLFSDGLQLFLEPQLG 145
           +L +  DG+Q+F+ P  G
Sbjct: 120 NLPILKDGVQIFIAPNNG 137


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 198 DLDLFSDGLQLFLEPQLG 145
           +L +  DG+Q+F+ P  G
Sbjct: 158 NLPILKDGVQIFIAPNNG 175


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 184 EQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQWAKT 327
           E   +MK + L    R   EIE+L  +RS   +   R+   T   +KT
Sbjct: 52  EHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 184 EQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQWAKT 327
           E   +MK + L    R   EIE+L  +RS   +   R+   T   +KT
Sbjct: 52  EHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 184 EQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQWAKT 327
           E   +MK + L    R   EIE+L  +RS   +   R+   T   +KT
Sbjct: 52  EHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 184 EQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQWAKT 327
           E   +MK + L    R   EIE+L  +RS   +   R+   T   +KT
Sbjct: 52  EHERLMKKMILEYELRRIREIEKLGSERSKSRSPGSRDRSNTSNTSKT 99


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 184 EQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQWAKT 327
           E   +MK + L    R   EIE+L  +RS   +   R+   T   +KT
Sbjct: 52  EHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 184 EQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQWAKT 327
           E   +MK + L    R   EIE+L  +RS   +   R+   T   +KT
Sbjct: 52  EHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 184 EQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQWAKT 327
           E   +MK + L    R   EIE+L  +RS   +   R+   T   +KT
Sbjct: 52  EHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 231 TSNVSKVQSFHDLDLFSDGLQLFLEPQ 151
           TSN+SK     D    SD + LF  P+
Sbjct: 93  TSNISKTVILSDKLESSDDISLFRGPE 119


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 184 EQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQWAKT 327
           E   +MK + L    R   EIE+L  +RS   +   R+   T   +KT
Sbjct: 52  EHQRLMKKMILEYEIRRIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 184 EQVEIMKTLHLTDITRLKSEIEELKHKRSTPTNNYERNEQATLQWAKT 327
           E   +MK + L    R   EIE+L  +RS   +   R+   T   +KT
Sbjct: 52  EHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSNTSNTSKT 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,228
Number of Sequences: 438
Number of extensions: 3256
Number of successful extensions: 24
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)