Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_E09
(623 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59530| Best HMM Match : NAC (HMM E-Value=4.6e-05) 60 1e-09
SB_26449| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_55980| Best HMM Match : rve (HMM E-Value=3.8e-23) 29 2.3
SB_23563| Best HMM Match : rve (HMM E-Value=3.3e-25) 29 2.3
SB_5144| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 5.4
SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42) 28 7.1
SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19) 28 7.1
SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5) 28 7.1
SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_24314| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_56761| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_95| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_59530| Best HMM Match : NAC (HMM E-Value=4.6e-05)
Length = 98
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +1
Query: 295 VNTIPGIEEVNMIKEDGTVIHFNNPKAQASLAA 393
VN IPGIEEVNMIKEDGTVIHFNNPKA+ A
Sbjct: 54 VNPIPGIEEVNMIKEDGTVIHFNNPKAEMGSGA 86
>SB_26449| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +1
Query: 532 EEDDEVPNLVGNFDEASKQEAKE 600
+EDDEVP LV NFDE SK E E
Sbjct: 10 DEDDEVPELVENFDEPSKTEGVE 32
>SB_55980| Best HMM Match : rve (HMM E-Value=3.8e-23)
Length = 1268
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 460 SQLGPDGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQE 591
+ LGP R+K I ++ PK +E D+ P G+++E +K+E
Sbjct: 996 TSLGPVK-ERMKNIFATYGTPKRVESDNGPPFNPGDYEEFAKEE 1038
>SB_23563| Best HMM Match : rve (HMM E-Value=3.3e-25)
Length = 640
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 460 SQLGPDGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQE 591
+ LGP R+K I ++ PK +E D+ P G+++E +K+E
Sbjct: 333 TSLGPVK-ERMKNIFATYGTPKRVESDNGPPFNSGDYEEFAKEE 375
>SB_5144| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1015
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 460 SQLGPDGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQE 591
+ LGP R+K I ++ PK +E D+ P G+++E +K+E
Sbjct: 858 TSLGPVK-ERMKNIFATYGTPKRVESDNGPPFNSGDYEEFAKEE 900
>SB_21496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1787
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 460 SQLGPDGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQE 591
+ LGP R+K I ++ PK +E D+ P G+++E +K+E
Sbjct: 1154 TSLGPVK-ERIKNIFATYGTPKRVESDNGPPFNSGDYEEFAKEE 1196
>SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2306
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 460 SQLGPDGLNRLKRIASSVAAPKPLEEDDEVPNLVGNFDEASKQE 591
+ LGP R+K I ++ PK +E D+ P G ++E +K+E
Sbjct: 1053 TSLGPVK-ERMKNIFATYGTPKRVESDNGPPFHSGAYEEFAKEE 1095
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -2
Query: 223 CVSVCP-YRRCVLATGVSLIFRCSFCC 146
C S+C Y RCV+ V++ CS C
Sbjct: 639 CTSICHRYGRCVMLANVTMFCNCSRAC 665
>SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42)
Length = 1264
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = +1
Query: 418 GENKQTTEMLPGILSQLGPDGLNRLKRIASSVAAP----KPLEEDDEVPNLVGNFDEASK 585
G +T+ P LSQL +NR+ R+ +S L +DE LV N + +
Sbjct: 57 GSTGKTSYQRPSCLSQLFLCWVNRILRVGNSKVLEGDDLTALSPEDEAQKLVENLEASWS 116
Query: 586 QEAKEVVTND 615
E E V D
Sbjct: 117 VERLEAVDAD 126
>SB_48164| Best HMM Match : DUF1168 (HMM E-Value=0.19)
Length = 1883
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/89 (25%), Positives = 35/89 (39%)
Frame = +1
Query: 337 EDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSVA 516
+ G+ IH A ++ A+ + TT+ PG +R+K ++SSV
Sbjct: 1506 KSGSSIHAPTSNEDRIKAVSSSAMAPKTSERFTTK--PGSSIDAPTGNKHRIKAVSSSVK 1563
Query: 517 APKPLEEDDEVPNLVGNFDEASKQEAKEV 603
APK E P N +K K V
Sbjct: 1564 APKTSERFATKPGSSINAPTGNKDRIKAV 1592
>SB_15235| Best HMM Match : DUF1421 (HMM E-Value=1.5)
Length = 754
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/89 (25%), Positives = 35/89 (39%)
Frame = +1
Query: 337 EDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSVA 516
+ G+ IH A ++ A+ + TT+ PG +R+K ++SSV
Sbjct: 377 KSGSSIHAPTSNEDRIKAVSSSAMAPKTSERFTTK--PGSSIDAPTGNKHRIKAVSSSVK 434
Query: 517 APKPLEEDDEVPNLVGNFDEASKQEAKEV 603
APK E P N +K K V
Sbjct: 435 APKTSERFATKPGSSINAPTGNKDRIKAV 463
>SB_29857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/23 (47%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -2
Query: 268 VFCHLWPQ*-REQPSSCVSVCPY 203
VF +WP+ RE P+SC+S P+
Sbjct: 734 VFAFIWPRFYREAPASCISELPW 756
>SB_24314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 367 PKAQASLAANTFAITGHGENKQTTEMLPGILSQLGP 474
P L ANT ITG G++ + ++ P I+ LGP
Sbjct: 248 PMRYPDLCANTLFITGKGQHHRQIKLQP-IVRALGP 282
>SB_56761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 27.5 bits (58), Expect = 9.4
Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +1
Query: 208 GTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKED-GTVIHFNNPKAQAS 384
G ++ K V T TDD T PG + + +IKE NN K +
Sbjct: 157 GMKEKESKCVETTDTTDDGTKTMNDLSENSETTPG-QTITIIKEHMPNTPQENNSKVDTT 215
Query: 385 LAANTFAITGHGENKQ 432
+ + I GEN Q
Sbjct: 216 IGQSK-EIVVEGENTQ 230
>SB_95| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +1
Query: 370 KAQASLAANTFA-ITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSVAAPK 525
K + A N F H +NK + L +L Q+G D R + SV K
Sbjct: 117 KGNVAAARNCFVGALSHSKNKASLRNLSMVLRQIGSDSKERADNVRLSVEKAK 169
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,618,263
Number of Sequences: 59808
Number of extensions: 378784
Number of successful extensions: 1005
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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