Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_E08
(343 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 84 7e-16
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 70 9e-12
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 65 3e-10
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 62 2e-09
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 55 3e-07
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 55 3e-07
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 53 1e-06
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 52 2e-06
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 51 4e-06
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 50 8e-06
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 50 8e-06
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 48 5e-05
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 45 4e-04
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 42 0.002
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 41 0.006
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 40 0.011
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 40 0.011
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 38 0.044
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 37 0.077
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 35 0.31
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 35 0.41
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 35 0.41
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 35 0.41
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 33 1.2
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 33 1.2
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 33 1.7
UniRef50_Q54GY7 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 33 1.7
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 32 2.2
UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeu... 31 5.0
UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5; Sulfol... 31 6.7
UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5; Euryar... 31 6.7
UniRef50_Q38EE2 Cluster: Metalloprotease-like protein; n=6; Tryp... 30 8.8
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 83.8 bits (198), Expect = 7e-16
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = +3
Query: 123 LTFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 254
L F TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGI
Sbjct: 26 LDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGI 69
Score = 48.0 bits (109), Expect = 4e-05
Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +1
Query: 58 RTKTVXXXXXXXXEKYYTTINT*LLIQIKEYVKKSLSFLPSL-LGIKLLDLPHI**GVSD 234
RTKTV EKYYT + L + + + ++ +P+ L K+ G
Sbjct: 5 RTKTVKKAAKVIIEKYYTRLT--LDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLR 62
Query: 235 TRKCEESSIKLXEXERERRDNYVPXVSALE 324
+ SIKL E ERERRDNYVP VSALE
Sbjct: 63 HSQVRGISIKLQEEERERRDNYVPAVSALE 92
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 70.1 bits (164), Expect = 9e-12
Identities = 36/57 (63%), Positives = 43/57 (75%)
Frame = +3
Query: 84 EDYY*KILYND*HLTFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 254
E YY + L ND F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGI
Sbjct: 18 EKYYTR-LGND----FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGI 69
Score = 45.2 bits (102), Expect = 3e-04
Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +1
Query: 58 RTKTVXXXXXXXXEKYYTTINT*LLIQIKEYVKKSLSFLPSL-LGIKLLD-LPHI**GVS 231
RTKTV EKYYT + + V + ++ +PS L K+ + H+ +
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDF--HTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQ 62
Query: 232 DTRKCEESSIKLXEXERERRDNYVPXVSALE 324
SIKL E ERERRDNYVP VSAL+
Sbjct: 63 -RGPVRGISIKLQEEERERRDNYVPEVSALD 92
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 64.9 bits (151), Expect = 3e-10
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = +3
Query: 123 LTFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 254
L F TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGI
Sbjct: 26 LDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGI 69
Score = 36.7 bits (81), Expect = 0.10
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 58 RTKTVXXXXXXXXEKYYTTINT*LLIQIKEYVKKSLSFLPSL-LGIKLLDLP-HI**GVS 231
RTKTV EKYY+ + L + V + +S LPS L K+ H+ +
Sbjct: 5 RTKTVKKTSRQVIEKYYSRMT--LDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQ 62
Query: 232 DTRKCEESSIKLXEXERERRDNYVPXVSALE 324
S+KL E ERERR ++VP SALE
Sbjct: 63 -RGPVRGISLKLQEEERERRMDFVPEKSALE 92
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 62.1 bits (144), Expect = 2e-09
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +3
Query: 84 EDYY*KILYND*HLTFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 254
E YY + L ND F TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGI
Sbjct: 73 EKYYTR-LGND----FHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGI 124
Score = 38.3 bits (85), Expect = 0.033
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 256 SIKLXEXERERRDNYVPXVSALE 324
SIKL E ERERRDNYVP SAL+
Sbjct: 125 SIKLQEEERERRDNYVPEGSALD 147
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 55.2 bits (127), Expect = 3e-07
Identities = 22/42 (52%), Positives = 33/42 (78%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 254
F T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGI
Sbjct: 65 FYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGI 106
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 55.2 bits (127), Expect = 3e-07
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = +3
Query: 84 EDYY*KILYND*HLTFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 254
E YY K L +D H NK+I E+ +P+K LRNKIAGFATHL++R++ V+GI
Sbjct: 58 EKYYMK-LTSDFHF----NKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGI 109
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQV 245
F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V
Sbjct: 77 FHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPV 115
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/42 (61%), Positives = 31/42 (73%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 254
F TNK +CE IAII +K LRNKI G+ HLM+R+R VRGI
Sbjct: 29 FYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGI 69
Score = 37.1 bits (82), Expect = 0.077
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = +1
Query: 256 SIKLXEXERERRDNYVPXVSALE 324
SIKL E ERE RDNYVP +S L+
Sbjct: 70 SIKLQEEERENRDNYVPEISVLD 92
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 51.2 bits (117), Expect = 4e-06
Identities = 25/43 (58%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Frame = +3
Query: 108 YND*HLT-FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 233
Y D T F+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 20 YRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 50.4 bits (115), Expect = 8e-06
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 254
F +NKR CEE II +K L NKI G+ HLM+R++ VRGI
Sbjct: 82 FCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGI 123
Score = 37.5 bits (83), Expect = 0.058
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +1
Query: 256 SIKLXEXERERRDNYVPXVSALE 324
SIKL E ERER+DNYVP +SA +
Sbjct: 124 SIKLQEKERERKDNYVPEISATD 146
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 50.4 bits (115), Expect = 8e-06
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +3
Query: 108 YND*HLTFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 254
Y+ + F NKR+ ++ I +K L+NKIAG+ TH+M+RL VRGI
Sbjct: 21 YSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPVRGI 69
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 47.6 bits (108), Expect = 5e-05
Identities = 22/37 (59%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Frame = +3
Query: 120 HLTFD--TNKRICEEIAIIPTKPLRNKIAGFATHLMR 224
HLT D NK C+EIA+I +K LRNKIAG+ THL++
Sbjct: 23 HLTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIK 59
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.8 bits (101), Expect = 4e-04
Identities = 27/57 (47%), Positives = 34/57 (59%)
Frame = +3
Query: 45 MGRVPD*NRQESGEDYY*KILYND*HLTFDTNKRICEEIAIIPTKPLRNKIAGFATH 215
MGR NR+E G ++ + N F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 1 MGRNRTKNREEGGPGHH--VGSN-----FHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 221
FDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 28 FDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 251
F+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 28 FEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 39.9 bits (89), Expect = 0.011
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 239
F +K +C+EI I ++ L +KIAG+ THLM+ +R S
Sbjct: 28 FYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGS 64
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 39.9 bits (89), Expect = 0.011
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 227
F+ NK+ EIA IP++ LRN+IAG+ T L+RR
Sbjct: 28 FELNKKKLMEIADIPSRQLRNQIAGYITRLVRR 60
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 37.9 bits (84), Expect = 0.044
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMR 224
F+ NKRI ++ P+K LRN+IAG+ T L+R
Sbjct: 28 FEHNKRIVSQLIETPSKKLRNQIAGYVTRLIR 59
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 37.1 bits (82), Expect = 0.077
Identities = 13/35 (37%), Positives = 26/35 (74%)
Frame = +3
Query: 126 TFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRL 230
TFD N + +++A++ +K L+N+IAG+ T L +++
Sbjct: 27 TFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKI 61
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 35.1 bits (77), Expect = 0.31
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 227
FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 28 FDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 34.7 bits (76), Expect = 0.41
Identities = 13/33 (39%), Positives = 25/33 (75%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 227
F NK+I E++I+ +K L+N+IAG+ T+ +++
Sbjct: 23 FADNKKILNEVSIVRSKGLKNEIAGYITNYIKK 55
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 34.7 bits (76), Expect = 0.41
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFAT 212
FD NK++ EI I +K +RN++AG+ T
Sbjct: 27 FDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 34.7 bits (76), Expect = 0.41
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 221
F+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 28 FEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 221
F NK E++A + TK +RN+IAG+ T M
Sbjct: 28 FTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 221
F+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 27 FEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 105 LYND*HLTFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHS 239
L ND H K +C+EI I P+K L KIAGF LM++++ +
Sbjct: 41 LSNDLH----NKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRN 80
>UniRef50_Q54GY7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 4590
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +1
Query: 10 ILVKSSAVQLQPWVVSRTKTVXXXXXXXXEKYYTTINT*LLIQIKEYVKKSLSFLPSLLG 189
+L+ + + LQPW + + + +K + + L + K+ V ++L+ +PS +
Sbjct: 3261 VLINKTMITLQPWAIDKATDLWIYYFNSYQKTQSKLAKISLTKRKQAVTRALNTIPSTIP 3320
Query: 190 IKLLDLP-HI**GVSDTRKC 246
IK +L HI + DT C
Sbjct: 3321 IKESNLSLHI--KIIDTNIC 3338
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 233
F+TNK + + I +K +RN++AG+ T + R++
Sbjct: 28 FETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 32.3 bits (70), Expect = 2.2
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATH 215
F+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 27 FELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A0RTT2 Cluster: Ribosomal protein S17E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S17E - Cenarchaeum
symbiosum
Length = 174
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 123 LTFDTNKRICEEIAIIPTKPLRNKIAGFATH 215
L+F+ NK+ E ++ I K L+N+IAG+ T+
Sbjct: 72 LSFEENKKTLERLSTIRYKILKNEIAGYITN 102
>UniRef50_Q4JAX5 Cluster: 30S ribosomal protein S17e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S17e -
Sulfolobus acidocaldarius
Length = 82
Score = 30.7 bits (66), Expect = 6.7
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMR 224
+D NK++ +E + +K ++N+IAG+ T ++
Sbjct: 28 YDDNKKLVDEYVNVSSKKVKNRIAGYLTRYVK 59
>UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Halobacterium salinarium (Halobacterium halobium)
Length = 59
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATH 215
F+ NK E+ I +K +RN+IAG+ TH
Sbjct: 28 FEHNKDAVTELTNIESKNVRNRIAGYITH 56
>UniRef50_Q38EE2 Cluster: Metalloprotease-like protein; n=6;
Trypanosomatidae|Rep: Metalloprotease-like protein -
Trypanosoma brucei
Length = 366
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Frame = -2
Query: 84 RRFLDGFSPG--HDPWLKLYSAAFDKNQRA 1
R+F DG PG HD +++ SAAF++ QRA
Sbjct: 291 RKFEDGIYPGCEHDRRMRIESAAFEELQRA 320
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 298,824,297
Number of Sequences: 1657284
Number of extensions: 4906492
Number of successful extensions: 10476
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 10361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10474
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10275329640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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