Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_E08
         (343 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   2.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   2.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   6.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   6.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   6.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   6.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    20   6.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   6.1  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 238 ECLRRLIKCVANPAILFLRGLVGMIAISSHILLFV 134
           +CL +L K  +    L L G     AI S IL+FV
Sbjct: 143 KCLYKLWKMPSLSEFLSLFGTETCPAIGSAILIFV 177


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 238 ECLRRLIKCVANPAILFLRGLVGMIAISSHILLFV 134
           +CL +L K  +    L L G     AI S IL+FV
Sbjct: 143 KCLYKLWKMPSLSEFLSLFGTETCPAIGSAILIFV 177


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 144 FYLYQKSSVNRCIVFF 97
           +++Y   SV +C++FF
Sbjct: 296 YFIYMFVSVWKCLLFF 311


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 144 FYLYQKSSVNRCIVFF 97
           +++Y   SV +C++FF
Sbjct: 296 YFIYMFVSVWKCLLFF 311


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 144 FYLYQKSSVNRCIVFF 97
           +++Y   SV +C++FF
Sbjct: 296 YFIYMFVSVWKCLLFF 311


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -2

Query: 144 FYLYQKSSVNRCIVFF 97
           +++Y   SV +C++FF
Sbjct: 296 YFIYMFVSVWKCLLFF 311


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = -2

Query: 135 YQKSSVNRCIVFFNNNLRRFLDGFSPGHDPWLKLYSAAFDKNQ 7
           YQ   V    + +N   + FLD        + + YS  F + Q
Sbjct: 184 YQNEEVTALKIKYNPFAKAFLDAKERPDSIYQREYSPTFTQQQ 226


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 254 DSSHLRVSETPH 219
           D+SH R+SE P+
Sbjct: 302 DTSHNRISEIPN 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,437
Number of Sequences: 336
Number of extensions: 1423
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6664455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)