BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_E08 (343 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_01_0066 - 537729-538163 65 1e-11 10_07_0174 + 13815478-13815903 65 2e-11 >03_01_0066 - 537729-538163 Length = 144 Score = 65.3 bits (152), Expect = 1e-11 Identities = 27/44 (61%), Positives = 37/44 (84%) Frame = +3 Query: 123 LTFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 254 L F TNK++ EE++I+P+K LRNK+AGF+THLMRR++ VRGI Sbjct: 26 LDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGI 69 Score = 35.5 bits (78), Expect = 0.011 Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 2/91 (2%) Frame = +1 Query: 58 RTKTVXXXXXXXXEKYYTTINT*LLIQIKEYVKKSLSFLPSL-LGIKLLDLP-HI**GVS 231 RTKTV EKYY+ + L + V + +S LPS L K+ H+ + Sbjct: 5 RTKTVKKTSRQVIEKYYSRMT--LDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRRIQ 62 Query: 232 DTRKCEESSIKLXEXERERRDNYVPXVSALE 324 S+KL E ERERR ++VP SALE Sbjct: 63 -RGPVRGISLKLQEEERERRMDFVPDRSALE 92 >10_07_0174 + 13815478-13815903 Length = 141 Score = 64.9 bits (151), Expect = 2e-11 Identities = 27/44 (61%), Positives = 36/44 (81%) Frame = +3 Query: 123 LTFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 254 L F TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGI Sbjct: 26 LDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGI 69 Score = 35.9 bits (79), Expect = 0.008 Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 2/91 (2%) Frame = +1 Query: 58 RTKTVXXXXXXXXEKYYTTINT*LLIQIKEYVKKSLSFLPSL-LGIKLLDLP-HI**GVS 231 RTKTV EKYY+ + L + V + +S LPS L K+ H+ + Sbjct: 5 RTKTVKKTSRQVIEKYYSRMT--LDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQ 62 Query: 232 DTRKCEESSIKLXEXERERRDNYVPXVSALE 324 S+KL E ERERR ++VP SALE Sbjct: 63 -RGPVRGISLKLQEEERERRMDFVPEKSALE 92 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,779,562 Number of Sequences: 37544 Number of extensions: 125272 Number of successful extensions: 261 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 255 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 261 length of database: 14,793,348 effective HSP length: 73 effective length of database: 12,052,636 effective search space used: 482105440 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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