Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_E08
         (343 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...    85   9e-19
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    22   5.5  
Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase pr...    21   9.6  
AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein p...    21   9.6  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score = 84.6 bits (200), Expect = 9e-19
 Identities = 38/44 (86%), Positives = 41/44 (93%)
 Frame = +3

Query: 123 LTFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 254
           + FDTNKRI EE+AIIPTKPLRNKIAGF THLM+RLRHSQVRGI
Sbjct: 26  MDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGI 69



 Score = 45.2 bits (102), Expect = 7e-07
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
 Frame = +1

Query: 58  RTKTVXXXXXXXXEKYYTTINT*LLIQIKEYVKKSLSFLPSL-LGIKLLD-LPHI**GVS 231
           RTKT+        EKYYT +   +     + + + ++ +P+  L  K+   + H+   + 
Sbjct: 5   RTKTIKKASKVIIEKYYTRLT--MDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLR 62

Query: 232 DTRKCEESSIKLXEXERERRDNYVPXVSALE 324
            + +    SIKL E ERERRDNYVP VSALE
Sbjct: 63  HS-QVRGISIKLQEEERERRDNYVPDVSALE 92


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 260 IEDSSHLRVSETP 222
           IED SH+++ E P
Sbjct: 282 IEDGSHIKIEERP 294


>Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase
           protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 207 ATHLMRRLRHSQVRGIL 257
           A H +RRL+ +++R IL
Sbjct: 48  AAHCVRRLKRNKIRVIL 64


>AB090824-1|BAC57923.1|  298|Anopheles gambiae gag-like protein
           protein.
          Length = 298

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 147 FFYLYQKSSVNRCIVFFNNNLRR 79
           +F LYQK  +N  ++  N+ +RR
Sbjct: 87  YFTLYQKVRLNPNLMEENSQIRR 109


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 316,751
Number of Sequences: 2352
Number of extensions: 5274
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)