Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_E08
(343 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000263-14|AAG00017.2| 130|Caenorhabditis elegans Ribosomal pr... 66 6e-12
Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical pr... 27 4.7
AF047657-4|AAK18948.3| 330|Caenorhabditis elegans Serpentine re... 27 4.7
Z92781-3|CAB07182.1| 326|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical pr... 26 6.1
AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuo... 26 6.1
AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuo... 26 6.1
AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuo... 26 6.1
AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuo... 26 6.1
AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuro... 26 6.1
AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuo... 26 6.1
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 26 6.1
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 26 6.1
U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical pr... 26 8.1
U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical pr... 26 8.1
>AF000263-14|AAG00017.2| 130|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 17 protein.
Length = 130
Score = 66.1 bits (154), Expect = 6e-12
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +3
Query: 129 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI 254
F NKR+C+E+AII +KPLRNKIAG+ THLMRR+ VRGI
Sbjct: 28 FHNNKRVCDEVAIIGSKPLRNKIAGYITHLMRRIERGPVRGI 69
Score = 36.7 bits (81), Expect = 0.004
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +1
Query: 256 SIKLXEXERERRDNYVPXVSALE 324
SIKL E ERERRDNY+P +S ++
Sbjct: 70 SIKLQEEERERRDNYMPEISTVD 92
>Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical
protein T19H5.3 protein.
Length = 407
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 229 SDTRKCEESSIKLXEXERERRDNYVPXVSAL 321
S+T+KC +L + +ER+ NYV V L
Sbjct: 194 SNTKKCSRFLCELKQKLKERKKNYVLSVQIL 224
>AF047657-4|AAK18948.3| 330|Caenorhabditis elegans Serpentine
receptor, class h protein240 protein.
Length = 330
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 155 FTYSFICIKSQVLIVV*YFSIIIFAAFLTVLVRD 54
FT F CI +LIVV F + IF F + D
Sbjct: 188 FTIPFSCIFCAMLIVVASFLVFIFLTFSNIWFGD 221
>Z92781-3|CAB07182.1| 326|Caenorhabditis elegans Hypothetical
protein F09C3.4 protein.
Length = 326
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 303 DIVVTPLTLLFXKFDRGFLALASV*DASLNVWQIQQ 196
DI + L+ KF GFL S+ +N W I Q
Sbjct: 175 DINYAEVVLILQKFKAGFLREISLDSEQINGWSIPQ 210
>Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical
protein ZK637.8f protein.
Length = 889
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 226 VSDTRKCEESSIKLXEXERERRDNYVPXVSALE 324
V++ R+C+E KL ERE + + +P + E
Sbjct: 64 VNEVRRCDEMERKLRYLEREIKKDQIPMLDTGE 96
>Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical
protein ZK637.8e protein.
Length = 888
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 226 VSDTRKCEESSIKLXEXERERRDNYVPXVSALE 324
V++ R+C+E KL ERE + + +P + E
Sbjct: 64 VNEVRRCDEMERKLRYLEREIKKDQIPMLDTGE 96
>Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical
protein ZK637.8d protein.
Length = 899
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 226 VSDTRKCEESSIKLXEXERERRDNYVPXVSALE 324
V++ R+C+E KL ERE + + +P + E
Sbjct: 64 VNEVRRCDEMERKLRYLEREIKKDQIPMLDTGE 96
>Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical
protein ZK637.8c protein.
Length = 894
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 226 VSDTRKCEESSIKLXEXERERRDNYVPXVSALE 324
V++ R+C+E KL ERE + + +P + E
Sbjct: 64 VNEVRRCDEMERKLRYLEREIKKDQIPMLDTGE 96
>Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical
protein ZK637.8b protein.
Length = 883
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 226 VSDTRKCEESSIKLXEXERERRDNYVPXVSALE 324
V++ R+C+E KL ERE + + +P + E
Sbjct: 64 VNEVRRCDEMERKLRYLEREIKKDQIPMLDTGE 96
>Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical
protein ZK637.8a protein.
Length = 905
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 226 VSDTRKCEESSIKLXEXERERRDNYVPXVSALE 324
V++ R+C+E KL ERE + + +P + E
Sbjct: 64 VNEVRRCDEMERKLRYLEREIKKDQIPMLDTGE 96
>AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuolar
proton pump 101kDa subunit variant protein.
Length = 889
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 226 VSDTRKCEESSIKLXEXERERRDNYVPXVSALE 324
V++ R+C+E KL ERE + + +P + E
Sbjct: 64 VNEVRRCDEMERKLRYLEREIKKDQIPMLDTGE 96
>AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuolar
proton pump 101kDa subunit variant protein.
Length = 888
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 226 VSDTRKCEESSIKLXEXERERRDNYVPXVSALE 324
V++ R+C+E KL ERE + + +P + E
Sbjct: 64 VNEVRRCDEMERKLRYLEREIKKDQIPMLDTGE 96
>AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuolar
proton pump 103kDa subunit variant protein.
Length = 899
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 226 VSDTRKCEESSIKLXEXERERRDNYVPXVSALE 324
V++ R+C+E KL ERE + + +P + E
Sbjct: 64 VNEVRRCDEMERKLRYLEREIKKDQIPMLDTGE 96
>AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuolar
proton pump 102kDa subunit variant protein.
Length = 894
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 226 VSDTRKCEESSIKLXEXERERRDNYVPXVSALE 324
V++ R+C+E KL ERE + + +P + E
Sbjct: 64 VNEVRRCDEMERKLRYLEREIKKDQIPMLDTGE 96
>AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuronal
vacuolar protonpump 100 kDa subunit variant protein.
Length = 883
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 226 VSDTRKCEESSIKLXEXERERRDNYVPXVSALE 324
V++ R+C+E KL ERE + + +P + E
Sbjct: 64 VNEVRRCDEMERKLRYLEREIKKDQIPMLDTGE 96
>AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuolar
proton pump 103kDa subunit variant protein.
Length = 905
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 226 VSDTRKCEESSIKLXEXERERRDNYVPXVSALE 324
V++ R+C+E KL ERE + + +P + E
Sbjct: 64 VNEVRRCDEMERKLRYLEREIKKDQIPMLDTGE 96
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 135 YQKSSVNRCIVFFNNNLRRFLDGFSPGHDPWLKLYSAAFDKNQR 4
Y K + + N LR F + P H W K + A F++ Q+
Sbjct: 926 YVKEFIEAAQFYINPILREFKET-DPRHVEWTKAWKAVFEEMQK 968
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -2
Query: 135 YQKSSVNRCIVFFNNNLRRFLDGFSPGHDPWLKLYSAAFDKNQR 4
Y K + + N LR F + P H W K + A F++ Q+
Sbjct: 165 YVKEFIEAAQFYINPILREFKET-DPRHVEWTKAWKAVFEEMQK 207
>U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical
protein F45E1.7a protein.
Length = 489
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 135 YQKSSVNRCIVFFNNNLRRFLDGFSPGHDPWLKLYSAAFDK 13
Y+K+S++ + +R D F PW KL DK
Sbjct: 107 YRKNSLHTSVFKGPKEIREIEDHFEKAQKPWKKLVDKMEDK 147
>U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical
protein F45E1.7b protein.
Length = 495
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 135 YQKSSVNRCIVFFNNNLRRFLDGFSPGHDPWLKLYSAAFDK 13
Y+K+S++ + +R D F PW KL DK
Sbjct: 113 YRKNSLHTSVFKGPKEIREIEDHFEKAQKPWKKLVDKMEDK 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,981,588
Number of Sequences: 27780
Number of extensions: 122443
Number of successful extensions: 250
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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