Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_E03
         (648 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open read...   142   1e-33
BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.    117   3e-26

>BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open reading
           frame 28 protein.
          Length = 480

 Score =  142 bits (344), Expect = 1e-33
 Identities = 66/135 (48%), Positives = 85/135 (62%), Gaps = 1/135 (0%)
 Frame = +1

Query: 247 SLKLQLGYGIGHVLNDVCASXXXXXXXXXXXXXXXXSNVQSGTLMLVGQMVDALATPFIG 426
           SL  +L Y +GH LND+CAS                S+  +G L+L+GQ+ D L TP +G
Sbjct: 18  SLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVG 77

Query: 427 YHSDHTDNFWSAKYGRRKLWHLFGTICVVTSFPFIFSECVGC-SLTHRWAQMYYFAAFIV 603
           Y +D   +   A+YG RK WHL GT+CV+ SFPFIFS C+GC + T  WA + Y+  FIV
Sbjct: 78  YEADRAASC-CARYGPRKAWHLVGTVCVLLSFPFIFSPCLGCGAATPEWAALLYYGPFIV 136

Query: 604 IFQIGWAAVQISHLS 648
           IFQ GWA+ QISHLS
Sbjct: 137 IFQFGWASTQISHLS 151


>BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.
          Length = 471

 Score =  117 bits (282), Expect = 3e-26
 Identities = 60/135 (44%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
 Frame = +1

Query: 247 SLKLQLGYGIGHVLNDVCASXXXXXXXXXXXXXXXXSNVQSGTLMLVGQMVDALATPFIG 426
           SL  +L Y +GH LND+CAS                S+  +G L+L+GQ+ D L TP +G
Sbjct: 18  SLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVG 77

Query: 427 YHSDHTDNFWSAKYGRRKLWHLFGTICVVTSFPFIFSECVGC-SLTHRWAQMYYFAAFIV 603
           Y +D   +   A+Y         GT+CV+ SFPFIFS C+GC + T  WA + Y+  FIV
Sbjct: 78  YEADRAAS-CCARY---------GTVCVLLSFPFIFSPCLGCGAATPEWAALLYYGPFIV 127

Query: 604 IFQIGWAAVQISHLS 648
           IFQ GWA+ QISHLS
Sbjct: 128 IFQFGWASTQISHLS 142


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,853,753
Number of Sequences: 237096
Number of extensions: 1773772
Number of successful extensions: 2607
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2603
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)