Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_D24
(486 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 122 3e-28
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 122 3e-28
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 122 3e-28
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 118 4e-27
AY113343-1|AAM29348.1| 1307|Drosophila melanogaster GH12701p pro... 28 5.9
AE014296-3443|AAF51654.2| 1307|Drosophila melanogaster CG32432-P... 28 5.9
AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p pro... 28 7.8
AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA... 28 7.8
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 122 bits (294), Expect = 3e-28
Identities = 65/111 (58%), Positives = 71/111 (63%)
Frame = +1
Query: 79 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEXINVRFLI 258
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+ LI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 259 TNIGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDDDMGFGLF 411
TNIGSG DDDMGFGLF
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLF 111
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 122 bits (294), Expect = 3e-28
Identities = 65/111 (58%), Positives = 71/111 (63%)
Frame = +1
Query: 79 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEXINVRFLI 258
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+ LI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 259 TNIGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDDDMGFGLF 411
TNIGSG DDDMGFGLF
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLF 111
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 122 bits (294), Expect = 3e-28
Identities = 65/111 (58%), Positives = 71/111 (63%)
Frame = +1
Query: 79 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEXINVRFLI 258
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+ LI
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLI 60
Query: 259 TNIGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDDDMGFGLF 411
TNIGSG DDDMGFGLF
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLF 111
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 118 bits (284), Expect = 4e-27
Identities = 64/111 (57%), Positives = 70/111 (63%)
Frame = +1
Query: 79 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEXINVRFLI 258
M +KAELA VY++LILVDDDVAVTGEKI+TILKAA V+VEPYWPGLFAKALE INV+ LI
Sbjct: 1 MSTKAELASVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLI 60
Query: 259 TNIGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDDDMGFGLF 411
TNIGSG DDDMGFGLF
Sbjct: 61 TNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESDQSDDDMGFGLF 111
>AY113343-1|AAM29348.1| 1307|Drosophila melanogaster GH12701p
protein.
Length = 1307
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 154 HQLRQHHHQPG*EQSKHMLIQLLTPFLVLNVQVAV 50
HQL+Q H Q +Q +H L LT L L + + +
Sbjct: 122 HQLQQQHQQSQHQQRRHPLPATLTLLLCLGISLGM 156
>AE014296-3443|AAF51654.2| 1307|Drosophila melanogaster CG32432-PA
protein.
Length = 1307
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 154 HQLRQHHHQPG*EQSKHMLIQLLTPFLVLNVQVAV 50
HQL+Q H Q +Q +H L LT L L + + +
Sbjct: 122 HQLQQQHQQSQHQQRRHPLPATLTLLLCLGISLGM 156
>AY061391-1|AAL28939.1| 1712|Drosophila melanogaster LD31383p protein.
Length = 1712
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -3
Query: 217 TDLANMALHLQPPLSRWWKFSHQLRQHHHQ 128
+ ++N +L+L+ P K H R+HHH+
Sbjct: 969 SSISNQSLNLEEPPPPMGKHHHHHREHHHR 998
>AE014298-1589|AAF48024.2| 1712|Drosophila melanogaster CG1657-PA
protein.
Length = 1712
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -3
Query: 217 TDLANMALHLQPPLSRWWKFSHQLRQHHHQ 128
+ ++N +L+L+ P K H R+HHH+
Sbjct: 969 SSISNQSLNLEEPPPPMGKHHHHHREHHHR 998
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,119,234
Number of Sequences: 53049
Number of extensions: 293588
Number of successful extensions: 1056
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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