Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_D21
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 252 1e-67
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 252 1e-67
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 251 3e-67
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 247 7e-66
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 235 2e-62
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 208 3e-54
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 159 2e-39
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 108 4e-24
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 31 0.80
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 31 1.1
07_03_1380 - 26163993-26164076,26164769-26165365 30 1.4
09_04_0292 - 16436918-16439233 29 3.2
08_02_0839 + 21693348-21694853 29 4.3
06_03_0384 + 20174441-20175788,20176215-20176858 29 4.3
05_01_0213 - 1606383-1606816,1607695-1608355 29 4.3
07_01_1093 + 10033403-10033984 28 5.6
12_02_0046 + 12830974-12832386 28 7.5
07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936 28 7.5
07_01_0524 + 3892340-3894625,3894995-3895109,3895204-3895298,389... 28 7.5
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 28 7.5
01_02_0099 + 11092529-11093140,11094153-11094424,11095378-110954... 28 7.5
11_06_0610 - 25449085-25453284 27 9.9
01_06_0443 - 29430891-29430980,29431098-29431241,29431331-294314... 27 9.9
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 252 bits (618), Expect = 1e-67
Identities = 124/178 (69%), Positives = 144/178 (80%)
Frame = +2
Query: 119 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 298
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 3 REENVYMAKLAEQAERYEEMVEYMEKVA-KTVDVEELTVEERNLLSVAYKNVIGARRASW 61
Query: 299 RIISSIEQKEETKGAXXKLNMIRAYRSQVXKELRDICSDILGVLDKYLIPSSQTGESKVF 478
RI+SSIEQKEE +G + +I+ YR ++ EL IC IL +LD +L+PSS ESKVF
Sbjct: 62 RIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVF 121
Query: 479 YYKMKGDYHRYLAEFATGNDRKEAAXNSLVAYKAXSDIAMTELAPTHPIRLGLALNFS 652
Y KMKGDYHRYLAEF TG +RKEAA +++VAYKA DIA+ +LAPTHPIRLGLALNFS
Sbjct: 122 YLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFS 179
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 252 bits (618), Expect = 1e-67
Identities = 124/178 (69%), Positives = 144/178 (80%)
Frame = +2
Query: 119 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 298
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 227 REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVIGARRASW 285
Query: 299 RIISSIEQKEETKGAXXKLNMIRAYRSQVXKELRDICSDILGVLDKYLIPSSQTGESKVF 478
RIISSIEQKEE++G + +I+ YR ++ EL IC IL +LD +L+PSS ESKVF
Sbjct: 286 RIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVF 345
Query: 479 YYKMKGDYHRYLAEFATGNDRKEAAXNSLVAYKAXSDIAMTELAPTHPIRLGLALNFS 652
Y KMKGDY+RYLAEF TG +RK+AA N++VAYKA DIA+ EL PTHPIRLGLALNFS
Sbjct: 346 YLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFS 403
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 251 bits (615), Expect = 3e-67
Identities = 123/178 (69%), Positives = 145/178 (81%)
Frame = +2
Query: 119 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 298
RE+NVY AKLAEQAERY+EMVE M+ VA + V ELTVEERNLLSVAYKNVIGARRASW
Sbjct: 9 REENVYMAKLAEQAERYEEMVEFMEKVA-KTVDSEELTVEERNLLSVAYKNVIGARRASW 67
Query: 299 RIISSIEQKEETKGAXXKLNMIRAYRSQVXKELRDICSDILGVLDKYLIPSSQTGESKVF 478
RIISSIEQKEE++G ++ +I+ YR ++ EL IC IL +L+ +L+PSS ESKVF
Sbjct: 68 RIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVF 127
Query: 479 YYKMKGDYHRYLAEFATGNDRKEAAXNSLVAYKAXSDIAMTELAPTHPIRLGLALNFS 652
Y KMKGDY+RYLAEF TG +RK+AA N++VAYKA DIA+ EL PTHPIRLGLALNFS
Sbjct: 128 YLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFS 185
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 247 bits (604), Expect = 7e-66
Identities = 123/185 (66%), Positives = 145/185 (78%)
Frame = +2
Query: 98 LSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 277
+S + RE+NVY AKLAEQAERY+EMVE M+ VA + ELTVEERNLLSVAYKNVI
Sbjct: 1 MSPAEASREENVYMAKLAEQAERYEEMVEFMEKVA-KTTDVGELTVEERNLLSVAYKNVI 59
Query: 278 GARRASWRIISSIEQKEETKGAXXKLNMIRAYRSQVXKELRDICSDILGVLDKYLIPSSQ 457
GARRASWRIISSIEQKEE++G + I+ YRS++ EL IC IL +LD +L+PS+
Sbjct: 60 GARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSAT 119
Query: 458 TGESKVFYYKMKGDYHRYLAEFATGNDRKEAAXNSLVAYKAXSDIAMTELAPTHPIRLGL 637
ESKVFY KMKGDYHRYLAEF +G +RKEAA N+LVAYK+ DIA+ +L THPIRLGL
Sbjct: 120 AAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGL 179
Query: 638 ALNFS 652
ALNFS
Sbjct: 180 ALNFS 184
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 235 bits (575), Expect = 2e-62
Identities = 118/180 (65%), Positives = 142/180 (78%), Gaps = 2/180 (1%)
Frame = +2
Query: 119 REDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDN--ELTVEERNLLSVAYKNVIGARRA 292
RE+ VY AKLAEQAERY+EMVE M+ V + + ELTVEERNLLSVAYKNVIGARRA
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 293 SWRIISSIEQKEETKGAXXKLNMIRAYRSQVXKELRDICSDILGVLDKYLIPSSQTGESK 472
SWRI+SSIEQKEE +GA R+YR++V EL +IC+ IL +LD+ L+P++ ++K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 473 VFYYKMKGDYHRYLAEFATGNDRKEAAXNSLVAYKAXSDIAMTELAPTHPIRLGLALNFS 652
VFY KMKGDYHRYLAEF TG +RK+AA +L AY+A DIAM EL+PTHPIRLGLALNFS
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFS 189
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 208 bits (508), Expect = 3e-54
Identities = 102/160 (63%), Positives = 121/160 (75%)
Frame = +2
Query: 173 EMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAXXK 352
E +E + A ELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEE +G
Sbjct: 3 EYMERVARAAGGASGGEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAH 62
Query: 353 LNMIRAYRSQVXKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKGDYHRYLAEFATG 532
IR+YR ++ EL IC IL +LD +L+PS+ ESKVFY KMKGDYHRYLAEF +G
Sbjct: 63 AATIRSYRGKIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSG 122
Query: 533 NDRKEAAXNSLVAYKAXSDIAMTELAPTHPIRLGLALNFS 652
++RK+AA +++ AYKA DIA+ +LAPTHPIRLGLALNFS
Sbjct: 123 DERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFS 162
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 159 bits (385), Expect = 2e-39
Identities = 81/157 (51%), Positives = 111/157 (70%)
Frame = +2
Query: 110 MSEREDNVYKAKLAEQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 289
M ERE V AKLAEQAERYD+MVE MK +A +V +++ EER L SV +K IGARR
Sbjct: 1 MKEREKVVRLAKLAEQAERYDDMVEFMKTLARMDV---DMSAEERLLFSVGFKKTIGARR 57
Query: 290 ASWRIISSIEQKEETKGAXXKLNMIRAYRSQVXKELRDICSDILGVLDKYLIPSSQTGES 469
ASWRI+ S+EQK T G + I Y+ +V ELR +C+++L ++ + +P + +GE+
Sbjct: 58 ASWRILESLEQKV-TAGDQPGVT-INGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGEN 115
Query: 470 KVFYYKMKGDYHRYLAEFATGNDRKEAAXNSLVAYKA 580
VF+YKMKGDY+RYLAEF+TG ++K A SL+AY+A
Sbjct: 116 VVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQA 152
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 108 bits (259), Expect = 4e-24
Identities = 65/135 (48%), Positives = 81/135 (60%)
Frame = +2
Query: 176 MVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAXXKL 355
MVEAM +VA D LT EERNLLSV YKN+IGA+RA+ RII SIE KEETKG +
Sbjct: 1 MVEAMNSVAKL---DEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHV 57
Query: 356 NMIRAYRSQVXKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKGDYHRYLAEFATGN 535
YR +V E+ IC D++ ++DK KGDY+RYLAEF TG
Sbjct: 58 RQTAEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYLAEFKTGT 99
Query: 536 DRKEAAXNSLVAYKA 580
++ E + SL AY+A
Sbjct: 100 EKIEVSELSLNAYEA 114
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 31.1 bits (67), Expect = 0.80
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 10/149 (6%)
Frame = +2
Query: 98 LSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVA--SRNVSDN------ELTVEERN-L 250
L TM E+ + L Q ++ + E +K V + ++SD+ L+ +N L
Sbjct: 239 LCKTMEEQSQLASEENL--QVAQHQLLKEDLKKVVVNASDISDSFDSFPYYLSENTKNAL 296
Query: 251 LSVAYKNVIGARRASW-RIISSIEQKEETKGAXXKLNMIRAYRSQVXKELRDICSDILGV 427
LS AY N+ W + ISS+ Q+ G Y+ + K L L +
Sbjct: 297 LSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAGS----EIYQESLVKALTKHFGAKLLI 352
Query: 428 LDKYLIPSSQTGESKVFYYKMKGDYHRYL 514
+D L+ S Q+ +SK KGD RY+
Sbjct: 353 IDPSLLASGQSSKSKESESYKKGDRVRYI 381
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 116 EREDNVYKAKLAEQAERYDEMVEAMKNVASRNVS-DNELTVEERNLLSVAYK 268
+R N + KLAE + E ++ +A +NVS E+T+ E N + V+ K
Sbjct: 396 DRRSNDWSVKLAEFQSEEQRLRERVRELAEQNVSFQREVTLLESNRIDVSNK 447
>07_03_1380 - 26163993-26164076,26164769-26165365
Length = 226
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 226 ADSGGEEPAVGRLQERDRRPPRLLADHLLHRTEGRNKRRXXQIEHDQSVPQ 378
A + P+ G+ + D RPP+ + + + + R RR EH+Q VPQ
Sbjct: 151 ATAAARPPSCGKESDDDHRPPQARSTSVGNE-QHRISRRDPPDEHEQHVPQ 200
>09_04_0292 - 16436918-16439233
Length = 771
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/82 (29%), Positives = 37/82 (45%)
Frame = +2
Query: 296 WRIISSIEQKEETKGAXXKLNMIRAYRSQVXKELRDICSDILGVLDKYLIPSSQTGESKV 475
W I +SI E+K + + Y +V L CS ++ LIP T S++
Sbjct: 548 WHIATSICCYGESKFDMAQADAELRYHYEVATVLSGYCSYLVAFAPD-LIPDG-TYTSQL 605
Query: 476 FYYKMKGDYHRYLAEFATGNDR 541
++ D H YLAE T +D+
Sbjct: 606 LSCRVLKDAHAYLAECRTTSDK 627
>08_02_0839 + 21693348-21694853
Length = 501
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 95 HLSSTMSEREDNVYKAKLAEQAERYDEMVEAMK 193
HLS M + E+ + K AE AE+ DE+V ++K
Sbjct: 235 HLSLVMEQEEEAEPEQKHAEAAEKADEVVVSVK 267
>06_03_0384 + 20174441-20175788,20176215-20176858
Length = 663
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +2
Query: 473 VFYYKMKGDYHRYLAEFATGNDRKEAAXNSLVAYKAXSDIAMTELAPTHPIRLGLA 640
++ Y KGD HR+L E G E + A ++++ H I LG+A
Sbjct: 456 LYEYMEKGDLHRWLHELPAGRPDMEDDTGGDIWEVAEDKRSISDWPTRHRIALGIA 511
>05_01_0213 - 1606383-1606816,1607695-1608355
Length = 364
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = +1
Query: 178 GGGDEECSITQRVRQ*ADSGGEEPAVGRLQERDRRPPRLLADHLLHRTEGRNKRRXXQIE 357
GGGD++ ++ +V+ + G V RL D PP R +RR +
Sbjct: 25 GGGDDDGAVVVQVQVQQEEGMSPCVVARLMGLDAMPPPPPETECQPLRRQRRRRRSRSVS 84
Query: 358 HDQSVPQP 381
+ P P
Sbjct: 85 SAEGWPPP 92
>07_01_1093 + 10033403-10033984
Length = 193
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 244 EPAVGRLQERDRRPPRLLADHLLHRTEGRNKRRXXQIEH 360
EPA R+Q R A L R GRN++R EH
Sbjct: 52 EPARARIQRASGREAERPARRLTSRCRGRNRQRLTANEH 90
>12_02_0046 + 12830974-12832386
Length = 470
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -1
Query: 248 GSSPPLSAHCRTRCVMLHSSSPPPFRHSAQPAQLTL 141
G S P S R CV +S+PPP R + QPA +L
Sbjct: 217 GGSVPASKATRQSCVT--ASAPPPRRVAPQPAPPSL 250
>07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936
Length = 838
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 184 GDEECSITQRVRQ*ADSGGEEPAVGRLQERDRRPPRLLA 300
GDE I + A EE A RL+ R+ RPP ++A
Sbjct: 256 GDELDEIARACEAAAALSAEESAYRRLRRRESRPPLVIA 294
>07_01_0524 +
3892340-3894625,3894995-3895109,3895204-3895298,
3895929-3896167,3896524-3896610,3896967-3897066,
3897908-3898115,3898224-3899422
Length = 1442
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 194 NVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKG 340
+ A +S+N+L + +RN++ K +GA + + SS K+ G
Sbjct: 537 DAACNAISENDLAMLQRNVVKRRTKKELGASKKKYEDSSSRNSKDNNAG 585
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +2
Query: 302 IISSIEQKEETKGAXXKLNMIRA--YRSQVXKELRDICSDILGVLDK 436
+++S++Q GA + IRA +R +V + L D+C +++GV +K
Sbjct: 787 VVASVDQ-----GASKYVPRIRAQPHRCEVIQHLGDMCKELIGVFEK 828
>01_02_0099 +
11092529-11093140,11094153-11094424,11095378-11095438,
11095553-11095622,11095645-11095901,11096466-11096639
Length = 481
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +1
Query: 415 HPRCPRQVPHPQLTDRRIKSFLLQNEGRLPPVPGRVRDRQRPQGGCRXLAGRV 573
H PR L + ++ L+NEGR +P + + GC + G V
Sbjct: 401 HALVPRTGDGAPLALQPLEKLRLENEGRNKVIPNLLASSMEKEDGCSRVGGAV 453
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -1
Query: 257 PTAGSSP-PLSAHCRTRCVMLHSSSPPPFRHSAQP 156
PT SP P S H T + SSSPPP H + P
Sbjct: 816 PTPEKSPSPPSGHEGTPPSPVKSSSPPPEAHVSSP 850
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -1
Query: 257 PTAGSSPPLSAHCRTRCVMLHSSSPPPFRHSAQP 156
P SSPP AH + SSSPPP H + P
Sbjct: 835 PVKSSSPPPEAHVSSP-PPEKSSSPPPEAHVSSP 867
>01_06_0443 -
29430891-29430980,29431098-29431241,29431331-29431401,
29431502-29431601,29432509-29432539,29432641-29432738,
29432868-29433005
Length = 223
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 416 ILGVLDKYLIPSSQTGESKVFYYKMKGDYHRYLAEFATGND 538
+LGV+ K L+P+ +G S V K+ D H AE A +D
Sbjct: 77 VLGVIPKALMPTEISGAS-VGEVKIVSDMHERKAEMARQSD 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,088,340
Number of Sequences: 37544
Number of extensions: 337443
Number of successful extensions: 1074
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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