Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_D20
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   131   4e-31
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...    83   2e-16
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    31   0.53 
Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p...    28   5.0  
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p...    27   8.7  
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical...    27   8.7  
AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical ...    27   8.7  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  131 bits (317), Expect = 4e-31
 Identities = 73/165 (44%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
 Frame = +2

Query: 101 PXALNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIASYTPAER 277
           P  L   N  LAE+++ +G+  S  D Q+F  +G AP A+  P+V RWY  +ASYT AER
Sbjct: 8   PAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAER 67

Query: 278 KTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXXLKAYAD 451
           KTW+   G++P                      DLFGS                L AYA+
Sbjct: 68  KTWASAGGSAPAAAAADGDDF------------DLFGSDDEEEDAEKAKIVEERLAAYAE 115

Query: 452 KKSKKPALIAKSSILLDVKPWDDETDMXEMENQVRTIEMEGLLWG 586
           KK+KK   IAKSS++LDVKPWDDETD+ EME  VR+IEM+GL+WG
Sbjct: 116 KKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWG 160



 Score = 33.1 bits (72), Expect = 0.17
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +1

Query: 592 SKLVPVGYGINKLQIMCVI 648
           +KL+P+GYGI KLQI+ VI
Sbjct: 162 AKLIPIGYGIKKLQIITVI 180


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score = 82.6 bits (195), Expect = 2e-16
 Identities = 40/72 (55%), Positives = 47/72 (65%)
 Frame = +2

Query: 371 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMXEMENQ 550
           DLFGS                L AYA KK+ K   IAKSS++LDVKPWDDETD+ EME  
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198

Query: 551 VRTIEMEGLLWG 586
           VR+IEM+GL+WG
Sbjct: 199 VRSIEMDGLVWG 210



 Score = 33.1 bits (72), Expect = 0.17
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +1

Query: 592 SKLVPVGYGINKLQIMCVI 648
           +KL+P+GYGI KLQI+ VI
Sbjct: 212 AKLIPIGYGIKKLQIITVI 230


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -2

Query: 272 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 135
           QP CM   + + VV+     PAP Q     + Q +++C+QT+   Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171


>Z81127-9|CAB03394.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 582 GGALQTCACWVWHK*TANYVCH 647
           G  LQ CA W+WHK   NY+ +
Sbjct: 184 GRKLQRCA-WLWHKLNENYITY 204


>Z81056-11|CAB02911.3|  735|Caenorhabditis elegans Hypothetical
           protein F09F3.9 protein.
          Length = 735

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 582 GGALQTCACWVWHK*TANYVCH 647
           G  LQ CA W+WHK   NY+ +
Sbjct: 184 GRKLQRCA-WLWHKLNENYITY 204


>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical protein
            M01F1.7 protein.
          Length = 1034

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +2

Query: 116  DLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAERKT 283
            D+ +Y  E+ Y+  Y  ++ D+Q           N PH L ++N   S  P ++K+
Sbjct: 875  DVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEPLKQKS 930


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 272 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 135
           QP CM   + + VV+     PA  Q     + Q +++C+QT+   Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171


>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
            protein M01F1.7 protein.
          Length = 1034

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +2

Query: 116  DLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAERKT 283
            D+ +Y  E+ Y+  Y  ++ D+Q           N PH L ++N   S  P ++K+
Sbjct: 875  DVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEPLKQKS 930


>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 227  HVLRWYNQIASYTPAERKTWSQGTSP 304
            H+L   +Q+ S TPA    W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549


>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 227  HVLRWYNQIASYTPAERKTWSQGTSP 304
            H+L   +Q+ S TPA    W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549


>AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical
           protein F52F10.2 protein.
          Length = 508

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +3

Query: 510 HGMMKPI*XKWKTKYALLKWKAFSGGALQTCACWVW 617
           H +   I   W  KY  +KW   +G  +   AC+++
Sbjct: 104 HALFVLIFAVWSFKYKTVKWPLIAGRIIAMVACFIY 139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,221,342
Number of Sequences: 27780
Number of extensions: 248146
Number of successful extensions: 555
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)