BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_D19 (560 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Y00638-1|CAA68669.1| 1304|Homo sapiens protein ( Human mRNA for ... 32 1.2 Y00062-1|CAA68269.1| 1143|Homo sapiens protein ( Human mRNA for ... 32 1.2 M23492-1|AAD15273.2| 1114|Homo sapiens T200 leukocyte common ant... 32 1.2 AL355988-3|CAI19378.1| 1306|Homo sapiens protein tyrosine phosph... 32 1.2 AL355988-2|CAI19379.1| 1145|Homo sapiens protein tyrosine phosph... 32 1.2 AL157402-4|CAI15641.1| 1306|Homo sapiens protein tyrosine phosph... 32 1.2 AL157402-3|CAI15640.1| 1145|Homo sapiens protein tyrosine phosph... 32 1.2 L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha prot... 29 8.5 CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein. 29 8.5 BC063798-1|AAH63798.1| 929|Homo sapiens SCY1-like 2 (S. cerevis... 29 8.5 BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein. 29 8.5 BC012387-1|AAH12387.3| 505|Homo sapiens SCYL2 protein protein. 29 8.5 BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directe... 29 8.5 BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directe... 29 8.5 AK027551-1|BAB55194.1| 756|Homo sapiens protein ( Homo sapiens ... 29 8.5 AK024274-1|BAB14869.1| 735|Homo sapiens protein ( Homo sapiens ... 29 8.5 AK001597-1|BAA91778.1| 446|Homo sapiens protein ( Homo sapiens ... 29 8.5 AB037781-1|BAA92598.1| 796|Homo sapiens KIAA1360 protein protein. 29 8.5 >Y00638-1|CAA68669.1| 1304|Homo sapiens protein ( Human mRNA for leukocyte common antigen (T200). ). Length = 1304 Score = 32.3 bits (70), Expect = 1.2 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%) Frame = +1 Query: 133 NAKEFDSVLKLYPQAIKLKAERKTKRPXELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 312 ++K DS Q E+ P ELI + + +LP+K S G H L+ Sbjct: 1106 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1165 Query: 313 QLMKWKQAXGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 426 Q G F L+ L T V + + KA RK Sbjct: 1166 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1204 >Y00062-1|CAA68269.1| 1143|Homo sapiens protein ( Human mRNA for T200 leukocyte common antigen (CD45, LC-A). ). Length = 1143 Score = 32.3 bits (70), Expect = 1.2 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%) Frame = +1 Query: 133 NAKEFDSVLKLYPQAIKLKAERKTKRPXELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 312 ++K DS Q E+ P ELI + + +LP+K S G H L+ Sbjct: 945 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1004 Query: 313 QLMKWKQAXGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 426 Q G F L+ L T V + + KA RK Sbjct: 1005 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1043 >M23492-1|AAD15273.2| 1114|Homo sapiens T200 leukocyte common antigen precursor protein. Length = 1114 Score = 32.3 bits (70), Expect = 1.2 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%) Frame = +1 Query: 133 NAKEFDSVLKLYPQAIKLKAERKTKRPXELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 312 ++K DS Q E+ P ELI + + +LP+K S G H L+ Sbjct: 916 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 975 Query: 313 QLMKWKQAXGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 426 Q G F L+ L T V + + KA RK Sbjct: 976 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1014 >AL355988-3|CAI19378.1| 1306|Homo sapiens protein tyrosine phosphatase, receptor type, C protein. Length = 1306 Score = 32.3 bits (70), Expect = 1.2 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%) Frame = +1 Query: 133 NAKEFDSVLKLYPQAIKLKAERKTKRPXELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 312 ++K DS Q E+ P ELI + + +LP+K S G H L+ Sbjct: 1108 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1167 Query: 313 QLMKWKQAXGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 426 Q G F L+ L T V + + KA RK Sbjct: 1168 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1206 >AL355988-2|CAI19379.1| 1145|Homo sapiens protein tyrosine phosphatase, receptor type, C protein. Length = 1145 Score = 32.3 bits (70), Expect = 1.2 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%) Frame = +1 Query: 133 NAKEFDSVLKLYPQAIKLKAERKTKRPXELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 312 ++K DS Q E+ P ELI + + +LP+K S G H L+ Sbjct: 947 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1006 Query: 313 QLMKWKQAXGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 426 Q G F L+ L T V + + KA RK Sbjct: 1007 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1045 >AL157402-4|CAI15641.1| 1306|Homo sapiens protein tyrosine phosphatase, receptor type, C protein. Length = 1306 Score = 32.3 bits (70), Expect = 1.2 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%) Frame = +1 Query: 133 NAKEFDSVLKLYPQAIKLKAERKTKRPXELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 312 ++K DS Q E+ P ELI + + +LP+K S G H L+ Sbjct: 1108 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1167 Query: 313 QLMKWKQAXGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 426 Q G F L+ L T V + + KA RK Sbjct: 1168 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1206 >AL157402-3|CAI15640.1| 1145|Homo sapiens protein tyrosine phosphatase, receptor type, C protein. Length = 1145 Score = 32.3 bits (70), Expect = 1.2 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 1/99 (1%) Frame = +1 Query: 133 NAKEFDSVLKLYPQAIKLKAERKTKRPXELIKLDNWYQNELPKKIKSRGKDAHMIHEELV 312 ++K DS Q E+ P ELI + + +LP+K S G H L+ Sbjct: 947 HSKRKDSRTVYQYQYTNWSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLI 1006 Query: 313 QLMKWKQAXGKFYPQLSYLIKVNTPRAV-MQETKKAFRK 426 Q G F L+ L T V + + KA RK Sbjct: 1007 HCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRK 1045 >L24559-1|AAA16459.1| 598|Homo sapiens DNA polymerase alpha protein. Length = 598 Score = 29.5 bits (63), Expect = 8.5 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 2/97 (2%) Frame = +1 Query: 169 PQAIKLKAERKTKRPXELIKLDNWYQNELP-KKIKSRGKDAHMIHE-ELVQLMKWKQAXG 342 P+ K T+ P +L+ ++ + P +K SR ++ L Q + W G Sbjct: 128 PETPLTKRSVSTRSPHQLLSPSSFSPSATPSQKYNSRSNRGEVVTSFGLAQGVSWSGRGG 187 Query: 343 KFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAMT 453 L L P A+ K F+KLP+I +T Sbjct: 188 AGNISLKVL---GCPEALTGSYKSMFQKLPDIREVLT 221 >CR456737-1|CAG33018.1| 598|Homo sapiens POLA2 protein. Length = 598 Score = 29.5 bits (63), Expect = 8.5 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 2/97 (2%) Frame = +1 Query: 169 PQAIKLKAERKTKRPXELIKLDNWYQNELP-KKIKSRGKDAHMIHE-ELVQLMKWKQAXG 342 P+ K T+ P +L+ ++ + P +K SR ++ L Q + W G Sbjct: 128 PETPLTKRSVSTRSPHQLLSPSSFSPSATPSQKYNSRSNRGEVVTSFGLAQGVSWSGRGG 187 Query: 343 KFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAMT 453 L L P A+ K F+KLP+I +T Sbjct: 188 AGNISLKVL---GCPEALTGSYKSMFQKLPDIREVLT 221 >BC063798-1|AAH63798.1| 929|Homo sapiens SCY1-like 2 (S. cerevisiae) protein. Length = 929 Score = 29.5 bits (63), Expect = 8.5 Identities = 19/66 (28%), Positives = 36/66 (54%) Frame = +1 Query: 265 IKSRGKDAHMIHEELVQLMKWKQAXGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIES 444 ++++ K A + EE +L K ++ K Q +V+TP A +++TK L + S Sbjct: 669 LQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMS 728 Query: 445 AMTALS 462 ++T+LS Sbjct: 729 SLTSLS 734 >BC044808-1|AAH44808.1| 440|Homo sapiens C14orf45 protein protein. Length = 440 Score = 29.5 bits (63), Expect = 8.5 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 5/91 (5%) Frame = +1 Query: 76 LERSQLATAKDTSTF--FLEANAKEFDSVLKLYPQAIKLKAERKTKRPXELIKLDNWYQ- 246 L++ Q KD + +L+ +E D++++ Q + E K K E KL+ Y Sbjct: 67 LKKKQCKMEKDIMSVLSYLKKQDQEKDNMIEKLKQQLN---ETKEKAQEEKDKLEQKYTR 123 Query: 247 --NELPKKIKSRGKDAHMIHEELVQLMKWKQ 333 NEL + + K+ MIH EL + ++++ Sbjct: 124 QINELEGQFHQKAKEIGMIHTELKAVRQFQK 154 >BC012387-1|AAH12387.3| 505|Homo sapiens SCYL2 protein protein. Length = 505 Score = 29.5 bits (63), Expect = 8.5 Identities = 19/66 (28%), Positives = 36/66 (54%) Frame = +1 Query: 265 IKSRGKDAHMIHEELVQLMKWKQAXGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIES 444 ++++ K A + EE +L K ++ K Q +V+TP A +++TK L + S Sbjct: 245 LQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMS 304 Query: 445 AMTALS 462 ++T+LS Sbjct: 305 SLTSLS 310 >BC002990-1|AAH02990.1| 598|Homo sapiens polymerase (DNA directed), alpha 2 (70kD subunit) protein. Length = 598 Score = 29.5 bits (63), Expect = 8.5 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 2/97 (2%) Frame = +1 Query: 169 PQAIKLKAERKTKRPXELIKLDNWYQNELP-KKIKSRGKDAHMIHE-ELVQLMKWKQAXG 342 P+ K T+ P +L+ ++ + P +K SR ++ L Q + W G Sbjct: 128 PETPLTKRSVSTRSPHQLLSPSSFSPSATPSQKYNSRSNRGEVVTSFGLAQGVSWSGRGG 187 Query: 343 KFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAMT 453 L L P A+ K F+KLP+I +T Sbjct: 188 AGNISLKVL---GCPEALTGSYKSMFQKLPDIREVLT 221 >BC001347-1|AAH01347.1| 598|Homo sapiens polymerase (DNA directed), alpha 2 (70kD subunit) protein. Length = 598 Score = 29.5 bits (63), Expect = 8.5 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 2/97 (2%) Frame = +1 Query: 169 PQAIKLKAERKTKRPXELIKLDNWYQNELP-KKIKSRGKDAHMIHE-ELVQLMKWKQAXG 342 P+ K T+ P +L+ ++ + P +K SR ++ L Q + W G Sbjct: 128 PETPLTKRSVSTRSPHQLLSPSSFSPSATPSQKYNSRSNRGEVVTSFGLAQGVSWSGRGG 187 Query: 343 KFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIESAMT 453 L L P A+ K F+KLP+I +T Sbjct: 188 AGNISLKVL---GCPEALTGSYKSMFQKLPDIREVLT 221 >AK027551-1|BAB55194.1| 756|Homo sapiens protein ( Homo sapiens cDNA FLJ14645 fis, clone NT2RP2001839, weakly similar to SCY1 PROTEIN. ). Length = 756 Score = 29.5 bits (63), Expect = 8.5 Identities = 19/66 (28%), Positives = 36/66 (54%) Frame = +1 Query: 265 IKSRGKDAHMIHEELVQLMKWKQAXGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIES 444 ++++ K A + EE +L K ++ K Q +V+TP A +++TK L + S Sbjct: 496 LQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMS 555 Query: 445 AMTALS 462 ++T+LS Sbjct: 556 SLTSLS 561 >AK024274-1|BAB14869.1| 735|Homo sapiens protein ( Homo sapiens cDNA FLJ14212 fis, clone NT2RP3003500, weakly similar to SCY1 PROTEIN. ). Length = 735 Score = 29.5 bits (63), Expect = 8.5 Identities = 19/66 (28%), Positives = 36/66 (54%) Frame = +1 Query: 265 IKSRGKDAHMIHEELVQLMKWKQAXGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIES 444 ++++ K A + EE +L K ++ K Q +V+TP A +++TK L + S Sbjct: 475 LQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMS 534 Query: 445 AMTALS 462 ++T+LS Sbjct: 535 SLTSLS 540 >AK001597-1|BAA91778.1| 446|Homo sapiens protein ( Homo sapiens cDNA FLJ10735 fis, clone NT2RP3001407, weakly similar to SCY1 PROTEIN. ). Length = 446 Score = 29.5 bits (63), Expect = 8.5 Identities = 19/66 (28%), Positives = 36/66 (54%) Frame = +1 Query: 265 IKSRGKDAHMIHEELVQLMKWKQAXGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIES 444 ++++ K A + EE +L K ++ K Q +V+TP A +++TK L + S Sbjct: 186 LQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMS 245 Query: 445 AMTALS 462 ++T+LS Sbjct: 246 SLTSLS 251 >AB037781-1|BAA92598.1| 796|Homo sapiens KIAA1360 protein protein. Length = 796 Score = 29.5 bits (63), Expect = 8.5 Identities = 19/66 (28%), Positives = 36/66 (54%) Frame = +1 Query: 265 IKSRGKDAHMIHEELVQLMKWKQAXGKFYPQLSYLIKVNTPRAVMQETKKAFRKLPNIES 444 ++++ K A + EE +L K ++ K Q +V+TP A +++TK L + S Sbjct: 536 LQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQPLKPQVHTPVATVKQTKDLTDTLMDNMS 595 Query: 445 AMTALS 462 ++T+LS Sbjct: 596 SLTSLS 601 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 78,910,607 Number of Sequences: 237096 Number of extensions: 1523648 Number of successful extensions: 2805 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2748 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2805 length of database: 76,859,062 effective HSP length: 86 effective length of database: 56,468,806 effective search space used: 5646880600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -