Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_D19
         (560 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099003-3|ABA00149.1|  759|Caenorhabditis elegans Hypothetical ...    29   3.0  
AF003386-14|AAK82896.1|  811|Caenorhabditis elegans Hypothetical...    28   5.3  
Z69792-2|CAA93667.1|  417|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF100307-5|AAC68933.2|  316|Caenorhabditis elegans Hypothetical ...    27   9.2  
AF098993-7|ABN43095.1|  525|Caenorhabditis elegans Hypothetical ...    27   9.2  
AF098993-6|AAC67469.2|  562|Caenorhabditis elegans Hypothetical ...    27   9.2  

>AF099003-3|ABA00149.1|  759|Caenorhabditis elegans Hypothetical
           protein Y59C2A.3 protein.
          Length = 759

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 354 AVVVSDKSEHATSCDARDEKGLPQTAQY--RIRDDRSKQSQRRGNGHSISV 500
           A + SD++   ++  A++++     A+Y     +DRS  +QRR   HS+ V
Sbjct: 179 ASISSDQNGDGSNMTAKEKRAAADRARYLRMSEEDRSALNQRRREKHSVDV 229


>AF003386-14|AAK82896.1|  811|Caenorhabditis elegans Hypothetical
           protein F59E12.1 protein.
          Length = 811

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 382 TPRAVMQETKKAFRKLPNIESAMTALSNLKG 474
           TP   +   +  FRK PN+E  MTA  + KG
Sbjct: 776 TPAGNVGMKRTVFRKDPNVEGIMTASGSRKG 806


>Z69792-2|CAA93667.1|  417|Caenorhabditis elegans Hypothetical
           protein F40E10.3 protein.
          Length = 417

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
 Frame = +1

Query: 100 AKDTSTFFLEANAKEFDSVLKLYPQAIKLKAERKTKRPXELIKLDNWYQNELPKKIK-SR 276
           A+DT +     + +E DS L  Y   ++L A+  TKR      ++   ++ L K+ +  +
Sbjct: 58  AEDTKSVVFFNDVEEDDSELDQYECFLQLSAQIMTKRGYNFYTVNTTKEHRLRKQEEVEK 117

Query: 277 GKDAHMIHEE 306
           G+D   ++++
Sbjct: 118 GEDTIHVYKD 127


>AF100307-5|AAC68933.2|  316|Caenorhabditis elegans Hypothetical
           protein T12B5.8 protein.
          Length = 316

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = +1

Query: 217 ELIKLDNWYQNELPKKIKSRGKDAHMIHEELVQLMKWKQA 336
           E++ + +W+ ++  K I+ R  D+    E + QL +WK A
Sbjct: 164 EVLTILSWFDSKELKTIELRWMDSIDRFERITQLEQWKNA 203


>AF098993-7|ABN43095.1|  525|Caenorhabditis elegans Hypothetical
           protein T10B11.7b protein.
          Length = 525

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 54  LNTQCCTFRTFTTGYRERHVYFLSGGKCK 140
           +N      +TF+T  R   V+F++G KCK
Sbjct: 238 INGSESNLKTFSTHLRRIDVFFIAGQKCK 266


>AF098993-6|AAC67469.2|  562|Caenorhabditis elegans Hypothetical
           protein T10B11.7a protein.
          Length = 562

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 54  LNTQCCTFRTFTTGYRERHVYFLSGGKCK 140
           +N      +TF+T  R   V+F++G KCK
Sbjct: 275 INGSESNLKTFSTHLRRIDVFFIAGQKCK 303


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,293,195
Number of Sequences: 27780
Number of extensions: 239299
Number of successful extensions: 604
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)