Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_D18
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.8  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 304 QWHRPYHPREAWQGRRALH 360
           QW +P  PRE    RR  H
Sbjct: 585 QWCKPCRPREQLTWRRNFH 603


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 304 QWHRPYHPREAWQGRRALH 360
           QW +P  PRE    RR  H
Sbjct: 477 QWCKPCRPREQLTWRRNFH 495


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 277 DSGHAVHLPQWHRPYHPREAW 339
           D G   HLP  H  + P  A+
Sbjct: 398 DGGEVAHLPNTHMGHEPGAAY 418


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 277 DSGHAVHLPQWHRPYHPREAW 339
           D G   HLP  H  + P  A+
Sbjct: 346 DGGEVAHLPNTHMGHEPGAAY 366


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +3

Query: 378  WSFLSMKNPSNLSRPHLSWXS*DNI*LPVVITXRS 482
            + F  + + S   +PH SW   DN     V++ +S
Sbjct: 2355 YGFAVLDSSSMTLKPHDSWADIDNEFYKKVVSYKS 2389


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,290
Number of Sequences: 336
Number of extensions: 2841
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)