Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_D18
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.7  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   6.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   6.3  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   6.3  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   6.3  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -2

Query: 248  HXQSQPQSSPLHLLKFRS 195
            + QSQPQ SPL L  F S
Sbjct: 1145 YAQSQPQGSPLRLYFFAS 1162


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = -2

Query: 248 HXQSQPQSSPLHLLKFRSLPTLPTHCHH 165
           H  S  Q S  H       PT  TH HH
Sbjct: 259 HPSSHQQQSQQHPSSQHQQPTHQTHHHH 286


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = -2

Query: 248 HXQSQPQSSPLHLLKFRSLPTLPTHCHH 165
           H  S  Q S  H       PT  TH HH
Sbjct: 259 HPSSHQQQSQQHPSSQHQQPTHQTHHHH 286


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/28 (39%), Positives = 11/28 (39%)
 Frame = -2

Query: 248 HXQSQPQSSPLHLLKFRSLPTLPTHCHH 165
           H  S  Q S  H       PT  TH HH
Sbjct: 211 HPSSHQQQSQQHPSSQHQQPTHQTHHHH 238


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -1

Query: 231 TIFATSSFEISKPSDF-AHTL 172
           T+  ++SFE+ KP DF  H+L
Sbjct: 845 TLTESTSFELKKPKDFRKHSL 865


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,017
Number of Sequences: 2352
Number of extensions: 12590
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)