Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_D18
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.          215   3e-58
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   5.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   7.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   7.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.8  

>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score =  215 bits (525), Expect = 3e-58
 Identities = 97/126 (76%), Positives = 111/126 (88%)
 Frame = +2

Query: 92  MSWQDYVDKQLMASXCVTKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFXNESLLTXGG 271
           MS QDYVDKQL+AS CVTKAAIAGHDGN+WAKSEGFE+SK+E+ K+V GF  + +LT  G
Sbjct: 1   MSCQDYVDKQLLASRCVTKAAIAGHDGNLWAKSEGFEVSKEELTKLVQGFEEQDILTSSG 60

Query: 272 VTIAGTRYIYLSGTDHIIRAKLGKVGVHCMXTQQAVVISLYEEPIQPQQAASVVXKLGQY 451
           VT+AG RYIYLSGTD +IRAKLGKVGVHCM T QAVV+SLYE+PIQPQQAASVV KLG Y
Sbjct: 61  VTLAGNRYIYLSGTDRVIRAKLGKVGVHCMKTTQAVVVSLYEDPIQPQQAASVVEKLGDY 120

Query: 452 LITCGY 469
           L++CGY
Sbjct: 121 LVSCGY 126


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 409 LDGFFIERNDHSLLCXH 359
           + G  IER DH++LC +
Sbjct: 327 ISGAPIERPDHAVLCVY 343


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/39 (25%), Positives = 15/39 (38%)
 Frame = -2

Query: 263 SLAVIHXQSQPQSSPLHLLKFRSLPTLPTHCHHDRQWQL 147
           SL  +H         +   K   LP      HHD +W++
Sbjct: 483 SLLFVHDTKNAGIWMIDFAKTLPLPQHLPRIHHDAEWKV 521


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/39 (25%), Positives = 15/39 (38%)
 Frame = -2

Query: 263 SLAVIHXQSQPQSSPLHLLKFRSLPTLPTHCHHDRQWQL 147
           SL  +H         +   K   LP      HHD +W++
Sbjct: 398 SLLFVHDTKNAGIWMIDFAKTLPLPQHLPRIHHDAEWKV 436


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/39 (25%), Positives = 15/39 (38%)
 Frame = -2

Query: 263 SLAVIHXQSQPQSSPLHLLKFRSLPTLPTHCHHDRQWQL 147
           SL  +H         +   K   LP      HHD +W++
Sbjct: 717 SLLFVHDTKNAGIWMIDFAKTLPLPQHLPRIHHDAEWKV 755


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,870
Number of Sequences: 438
Number of extensions: 2943
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)