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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_D17
         (603 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC26A3.04 |rpl2002|rpl20, rpl20-2|60S ribosomal protein L20|Sc...   132   4e-32
SPAC3A12.10 |rpl2001|rpl20-1, rpl20, yl17b, rpl18a-2|60S ribosom...   132   4e-32
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch...    29   0.40 
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro...    26   3.7  
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch...    26   4.9  
SPBC8D2.05c |sfi1||spindle pole body protein Sfi1|Schizosaccharo...    25   6.4  
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces...    25   8.5  
SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces ...    25   8.5  

>SPAC26A3.04 |rpl2002|rpl20, rpl20-2|60S ribosomal protein
           L20|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 176

 Score =  132 bits (319), Expect = 4e-32
 Identities = 70/153 (45%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
 Frame = +1

Query: 106 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYESR 285
           ++MR+F+P+  VAKSR+WYFL+ + K KK TG                  FGIW+RY+SR
Sbjct: 24  FRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEISEPKPLKAKVFGIWIRYDSR 83

Query: 286 SGVHNMYREYRDLSVXGAVTQCYRDMGAXHRARAHSIQIIK-VEVIXAAACRRPQVKQFH 462
           SG HNMY+E+RD +  GAV   Y DM A HRAR  SI+I+K VEV      RR  VKQ  
Sbjct: 84  SGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILKVVEVEKKEDVRRNYVKQLL 143

Query: 463 NSTIRFPLPKR---VHHYKRLNTFAYKRPXTYF 552
           N  ++FPLP R   V        FA  RP T++
Sbjct: 144 NPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY 176



 Score = 35.5 bits (78), Expect = 0.006
 Identities = 13/21 (61%), Positives = 19/21 (90%)
 Frame = +3

Query: 42  LREYEVIGRKLPSENEPKPPL 104
           L+EY+V+GRK+P+E+EP P L
Sbjct: 3   LKEYQVVGRKVPTEHEPVPKL 23


>SPAC3A12.10 |rpl2001|rpl20-1, rpl20, yl17b, rpl18a-2|60S ribosomal
           protein L20a|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 176

 Score =  132 bits (319), Expect = 4e-32
 Identities = 70/153 (45%), Positives = 89/153 (58%), Gaps = 4/153 (2%)
 Frame = +1

Query: 106 YKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYESR 285
           ++MR+F+P+  VAKSR+WYFL+ + K KK TG                  FGIW+RY+SR
Sbjct: 24  FRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEISEPKPLKAKVFGIWIRYDSR 83

Query: 286 SGVHNMYREYRDLSVXGAVTQCYRDMGAXHRARAHSIQIIK-VEVIXAAACRRPQVKQFH 462
           SG HNMY+E+RD +  GAV   Y DM A HRAR  SI+I+K VEV      RR  VKQ  
Sbjct: 84  SGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILKVVEVEKKEDVRRNYVKQLL 143

Query: 463 NSTIRFPLPKR---VHHYKRLNTFAYKRPXTYF 552
           N  ++FPLP R   V        FA  RP T++
Sbjct: 144 NPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY 176



 Score = 35.5 bits (78), Expect = 0.006
 Identities = 13/21 (61%), Positives = 19/21 (90%)
 Frame = +3

Query: 42  LREYEVIGRKLPSENEPKPPL 104
           L+EY+V+GRK+P+E+EP P L
Sbjct: 3   LKEYQVVGRKVPTEHEPVPKL 23


>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
           Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 515

 Score = 29.5 bits (63), Expect = 0.40
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = +3

Query: 303 VP*IP*PECXWSCHSVLQRYGSXTQSPSSFNTDYQSGSNQXCCVSPSTGQTVPQQHHQIP 482
           +P  P P    +  +VLQ++       SS +      SNQ   +SPST  +    HH   
Sbjct: 68  LPPPPSPGILATSPAVLQKHQQEDSGNSSQSPTSPHPSNQPAMLSPSTAASQHHHHHSSS 127

Query: 483 IAQTCAPLQET 515
            +   +P   T
Sbjct: 128 SSYAVSPTSPT 138


>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
           protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1385

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 122 SLRIQLSPNLVSGIS*DNLRSSRRPLVKLSLLRKFXRK 235
           S ++   P++V   S D+ + SRRP +  S  RKF  K
Sbjct: 295 SPKVSKRPSIVRQDSHDSNKLSRRPTINTSFDRKFSPK 332


>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 662

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -3

Query: 163 NTRNEIWRQLDPERKFSFYSKGGLGSFSDGSLRPITSYS 47
           +T  +      PE   + + +G LG F D S+R   S S
Sbjct: 139 DTMKDAETSASPEATIAVFGRGKLGGFDDQSIRKAKSNS 177


>SPBC8D2.05c |sfi1||spindle pole body protein
           Sfi1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 840

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 130 DPIVAKSRFWYFLRQLKKFK 189
           D ++   RFWY+L + K F+
Sbjct: 476 DRLIVTFRFWYYLMKAKSFQ 495


>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1441

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 201  TSGLLELLKLSQEIPETRFGDNWIRRENSH 112
            TSG L LL    E PE+  G+  + R + H
Sbjct: 1274 TSGNLRLLAYDPENPESHSGERLVTRGDFH 1303


>SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 409

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 483 WESDGAVVELFDLWTATRSSXDY 415
           WE  G  V+ +  W A   S DY
Sbjct: 145 WEKLGVTVDTYPYWDAKNRSFDY 167


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,412,241
Number of Sequences: 5004
Number of extensions: 45961
Number of successful extensions: 137
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 264253462
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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