Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_D17
(603 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 206 6e-53
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 206 6e-53
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 206 6e-53
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 206 6e-53
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 206 6e-53
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 206 6e-53
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 155 9e-38
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 155 1e-37
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 91 2e-18
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 206 bits (502), Expect = 6e-53
Identities = 95/151 (62%), Positives = 110/151 (72%)
Frame = +1
Query: 100 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYE 279
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++G NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 280 SRSGVHNMYREYRDLSVXGAVTQCYRDMGAXHRARAHSIQIIKVEVIXAAACRRPQVKQF 459
SRSG HNMYREYRDL+ GAVTQCYRDMGA HRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 460 HNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 552
H+S I+FPLP RV + F KRP T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPL 104
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 206 bits (502), Expect = 6e-53
Identities = 95/151 (62%), Positives = 110/151 (72%)
Frame = +1
Query: 100 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYE 279
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++G NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 280 SRSGVHNMYREYRDLSVXGAVTQCYRDMGAXHRARAHSIQIIKVEVIXAAACRRPQVKQF 459
SRSG HNMYREYRDL+ GAVTQCYRDMGA HRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 460 HNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 552
H+S I+FPLP RV + F KRP T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPL 104
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 206 bits (502), Expect = 6e-53
Identities = 95/151 (62%), Positives = 110/151 (72%)
Frame = +1
Query: 100 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYE 279
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++G NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 280 SRSGVHNMYREYRDLSVXGAVTQCYRDMGAXHRARAHSIQIIKVEVIXAAACRRPQVKQF 459
SRSG HNMYREYRDL+ GAVTQCYRDMGA HRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 460 HNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 552
H+S I+FPLP RV + F KRP T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPL 104
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 206 bits (502), Expect = 6e-53
Identities = 95/151 (62%), Positives = 110/151 (72%)
Frame = +1
Query: 100 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYE 279
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++G NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 280 SRSGVHNMYREYRDLSVXGAVTQCYRDMGAXHRARAHSIQIIKVEVIXAAACRRPQVKQF 459
SRSG HNMYREYRDL+ GAVTQCYRDMGA HRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 460 HNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 552
H+S I+FPLP RV + F KRP T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPL 104
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 206 bits (502), Expect = 6e-53
Identities = 95/151 (62%), Positives = 110/151 (72%)
Frame = +1
Query: 100 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYE 279
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++G NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 280 SRSGVHNMYREYRDLSVXGAVTQCYRDMGAXHRARAHSIQIIKVEVIXAAACRRPQVKQF 459
SRSG HNMYREYRDL+ GAVTQCYRDMGA HRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 460 HNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 552
H+S I+FPLP RV + F KRP T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPL 104
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 206 bits (502), Expect = 6e-53
Identities = 95/151 (62%), Positives = 110/151 (72%)
Frame = +1
Query: 100 PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYE 279
P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++G NFGIWLRY+
Sbjct: 26 PLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYD 85
Query: 280 SRSGVHNMYREYRDLSVXGAVTQCYRDMGAXHRARAHSIQIIKVEVIXAAACRRPQVKQF 459
SRSG HNMYREYRDL+ GAVTQCYRDMGA HRARAHSIQI+KVE I A+ CRRP VKQF
Sbjct: 86 SRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQF 145
Query: 460 HNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 552
H+S I+FPLP RV + F KRP T+F
Sbjct: 146 HDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.14
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPL 104
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 155 bits (377), Expect = 9e-38
Identities = 76/131 (58%), Positives = 89/131 (67%), Gaps = 3/131 (2%)
Frame = +1
Query: 46 GNMRLSAVSSRRRTSPNL---PCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXX 216
G +R V RR +P P Y+MRIF+P+ +VAKSRFWYF+ QLKK KK++G
Sbjct: 5 GTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGETVYC 64
Query: 217 XXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVXGAVTQCYRDMGAXHRARAHSI 396
NFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGA HRARAHSI
Sbjct: 65 GQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSI 124
Query: 397 QIIKVEVIXAA 429
QI+ VE I A+
Sbjct: 125 QIMMVEEIAAS 135
Score = 37.5 bits (83), Expect = 0.036
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 24 MKAKGQLREYEVIGRKLPSENEPKPPL 104
MKA G LREY+V+GR+LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRRLPTPKCHTPPL 27
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 155 bits (376), Expect = 1e-37
Identities = 70/100 (70%), Positives = 78/100 (78%)
Frame = +1
Query: 253 NFGIWLRYESRSGVHNMYREYRDLSVXGAVTQCYRDMGAXHRARAHSIQIIKVEVIXAAA 432
NFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGA HRARAHSIQI+KVE I +
Sbjct: 41 NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100
Query: 433 CRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 552
CRRP VKQFH+S I+FPLP RV + F KRP T+F
Sbjct: 101 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 91.5 bits (217), Expect = 2e-18
Identities = 43/66 (65%), Positives = 49/66 (74%)
Frame = +1
Query: 355 RDMGAXHRARAHSIQIIKVEVIXAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYK 534
RDMGA HRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 535 RPXTYF 552
RP T+F
Sbjct: 61 RPNTFF 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,780,856
Number of Sequences: 237096
Number of extensions: 1655814
Number of successful extensions: 3368
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3361
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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