Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_D17
         (603 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal prot...   222   3e-58
AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p pro...   222   3e-58
AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA...   222   3e-58
BT023059-1|AAY55475.1|  328|Drosophila melanogaster IP10969p pro...    35   0.074
AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p pro...    29   3.7  
AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-P...    29   3.7  
AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-P...    29   3.7  
AF109078-1|AAD26132.1| 1377|Drosophila melanogaster mutant epide...    29   4.9  
AE013599-3221|AAM70919.1| 1377|Drosophila melanogaster CG10079-P...    29   6.4  

>X75339-1|CAA53089.1|  177|Drosophila melanogaster ribosomal protein
           L18a protein.
          Length = 177

 Score =  222 bits (543), Expect = 3e-58
 Identities = 104/154 (67%), Positives = 115/154 (74%)
 Frame = +1

Query: 91  PNLPCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWL 270
           P  P YKMRIF+PD IVAKSRFWYFLRQLKKFKKTTG                 NFGIWL
Sbjct: 23  PQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWL 82

Query: 271 RYESRSGVHNMYREYRDLSVXGAVTQCYRDMGAXHRARAHSIQIIKVEVIXAAACRRPQV 450
           RY+SRSG HNMYREYRDL+V GAVTQCYRDMGA HRARAHSIQIIKV+ I AA  RR  V
Sbjct: 83  RYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHV 142

Query: 451 KQFHNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 552
           KQFH+S I+FPL +RVHH      F++++P TYF
Sbjct: 143 KQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176



 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +3

Query: 24  MKAKGQLREYEVIGRKLPSENEPKPPL 104
           M+AKG L+EYEV+GRKLPSE EP+ PL
Sbjct: 1   MRAKGLLKEYEVVGRKLPSEKEPQTPL 27


>AY071222-1|AAL48844.1|  177|Drosophila melanogaster RE26382p
           protein.
          Length = 177

 Score =  222 bits (543), Expect = 3e-58
 Identities = 104/154 (67%), Positives = 115/154 (74%)
 Frame = +1

Query: 91  PNLPCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWL 270
           P  P YKMRIF+PD IVAKSRFWYFLRQLKKFKKTTG                 NFGIWL
Sbjct: 23  PQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWL 82

Query: 271 RYESRSGVHNMYREYRDLSVXGAVTQCYRDMGAXHRARAHSIQIIKVEVIXAAACRRPQV 450
           RY+SRSG HNMYREYRDL+V GAVTQCYRDMGA HRARAHSIQIIKV+ I AA  RR  V
Sbjct: 83  RYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHV 142

Query: 451 KQFHNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 552
           KQFH+S I+FPL +RVHH      F++++P TYF
Sbjct: 143 KQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176



 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +3

Query: 24  MKAKGQLREYEVIGRKLPSENEPKPPL 104
           M+AKG L+EYEV+GRKLPSE EP+ PL
Sbjct: 1   MRAKGLLKEYEVVGRKLPSEKEPQTPL 27


>AE013599-2503|AAF57838.1|  177|Drosophila melanogaster CG6510-PA
           protein.
          Length = 177

 Score =  222 bits (543), Expect = 3e-58
 Identities = 104/154 (67%), Positives = 115/154 (74%)
 Frame = +1

Query: 91  PNLPCYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWL 270
           P  P YKMRIF+PD IVAKSRFWYFLRQLKKFKKTTG                 NFGIWL
Sbjct: 23  PQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWL 82

Query: 271 RYESRSGVHNMYREYRDLSVXGAVTQCYRDMGAXHRARAHSIQIIKVEVIXAAACRRPQV 450
           RY+SRSG HNMYREYRDL+V GAVTQCYRDMGA HRARAHSIQIIKV+ I AA  RR  V
Sbjct: 83  RYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHV 142

Query: 451 KQFHNSTIRFPLPKRVHHYKRLNTFAYKRPXTYF 552
           KQFH+S I+FPL +RVHH      F++++P TYF
Sbjct: 143 KQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYF 176



 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +3

Query: 24  MKAKGQLREYEVIGRKLPSENEPKPPL 104
           M+AKG L+EYEV+GRKLPSE EP+ PL
Sbjct: 1   MRAKGLLKEYEVVGRKLPSEKEPQTPL 27


>BT023059-1|AAY55475.1|  328|Drosophila melanogaster IP10969p
          protein.
          Length = 328

 Score = 35.1 bits (77), Expect = 0.074
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +3

Query: 24 MKAKGQLREYEVIGRKLP 77
          M+AKG L+EYEV+GRKLP
Sbjct: 1  MRAKGLLKEYEVVGRKLP 18


>AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p
           protein.
          Length = 1124

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +2

Query: 350 ATEIWELXTEPELIQYRLSKWK*SXLLRVAVHRSNSSTTAPSDSH 484
           A   W + +   L+Q R + WK S LL   +   + S    S SH
Sbjct: 45  AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 89


>AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-PB,
           isoform B protein.
          Length = 1087

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +2

Query: 350 ATEIWELXTEPELIQYRLSKWK*SXLLRVAVHRSNSSTTAPSDSH 484
           A   W + +   L+Q R + WK S LL   +   + S    S SH
Sbjct: 8   AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 52


>AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-PA,
           isoform A protein.
          Length = 1124

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +2

Query: 350 ATEIWELXTEPELIQYRLSKWK*SXLLRVAVHRSNSSTTAPSDSH 484
           A   W + +   L+Q R + WK S LL   +   + S    S SH
Sbjct: 45  AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 89


>AF109078-1|AAD26132.1| 1377|Drosophila melanogaster mutant
           epidermal growth factorreceptor isoform II protein.
          Length = 1377

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +3

Query: 333 WSCHSVLQRYGSXTQSPSSFNTDYQSGSNQXCCVSPSTGQTVP--QQHH 473
           WS   +L    S T S S+ N  Y    N   C+   +  +VP  ++HH
Sbjct: 21  WSVLLILACMESITTSSSASNAGYVDNGNMKVCIGTKSRLSVPSNKEHH 69


>AE013599-3221|AAM70919.1| 1377|Drosophila melanogaster CG10079-PA,
           isoform A protein.
          Length = 1377

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
 Frame = +3

Query: 333 WSCHSVLQRYGSXTQSPSSFNTDYQSGSNQXCCVSPSTGQTVP--QQHH 473
           WS   +L    S T S S  N  Y    N   C+   +  +VP  ++HH
Sbjct: 21  WSVLLILACMASITTSSSVSNAGYVDNGNMKVCIGTKSRLSVPSNKEHH 69


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,253,461
Number of Sequences: 53049
Number of extensions: 523748
Number of successful extensions: 1712
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)