BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_D15 (653 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual 66 6e-12 SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces pombe... 31 0.19 SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 27 1.8 SPBC3D6.03c |||tRNA endonuclease |Schizosaccharomyces pombe|chr ... 26 4.1 SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 26 4.1 SPAC3F10.02c |trk1|sptrk|potassium ion transporter Trk1|Schizosa... 26 5.5 SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 25 7.2 >SPCC736.09c |||TRAX |Schizosaccharomyces pombe|chr 3|||Manual Length = 231 Score = 65.7 bits (153), Expect = 6e-12 Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 1/101 (0%) Frame = +1 Query: 253 LNERQDRHERLVKLSRDITIXSKRIIFLLHSAITEESTAKVIE-EAKERFQKLIKGPIKS 429 L E QD+ E++++LSR+ITI SKR+IFLLH + + + + F+K I ++S Sbjct: 12 LQEDQDKREKIIRLSREITIQSKRMIFLLHQTSSSDGFPLPKDFDRTSIFEKKIHKELES 71 Query: 430 VGLELENSPAYLHSRAVTAGFQEYIEARTLFSLMETKKLIS 552 + EL A S A T G QEY+EA T ++T L+S Sbjct: 72 LKRELAGLNADKFSSACTHGLQEYVEAVTFKFWLQTGTLLS 112 >SPAC19A8.15 |trp2||tryptophan synthase|Schizosaccharomyces pombe|chr 1|||Manual Length = 697 Score = 30.7 bits (66), Expect = 0.19 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = +1 Query: 211 DSPILAMFKNAALKLNERQDRHERLVKLSRDITIXSKRIIFLLHSAITEESTAKVIEEAK 390 D P + ALK N ++ VKL+RD + I+ ++ I AK I++AK Sbjct: 61 DGPTICKGNEIALKNNITLEKVFETVKLARDAGVTIPIILMGYYNPIFSYGDAKTIQKAK 120 Query: 391 E 393 E Sbjct: 121 E 121 >SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 851 Score = 27.5 bits (58), Expect = 1.8 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +1 Query: 370 KVIEEAKERFQKLIKGPIKSVGLELENSPAYLH 468 K EE K++ Q L + KSV ++L+ P Y H Sbjct: 217 KAKEETKQKLQDLYE-EFKSVAVDLQGDPKYQH 248 >SPBC3D6.03c |||tRNA endonuclease |Schizosaccharomyces pombe|chr 2|||Manual Length = 678 Score = 26.2 bits (55), Expect = 4.1 Identities = 12/51 (23%), Positives = 28/51 (54%) Frame = +1 Query: 70 SLIFIRIAFVR*YWFKMSGRGRQRSYRNRNQQTLSTVAREAAASLAPDSPI 222 +L+F ++ + W+ + Q ++RN++++ + + +SL PDS I Sbjct: 11 ALLFGQLLPPKYSWYSVKRWQSQLTFRNKSKRNTNRIMLSVVSSLNPDSLI 61 >SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase Fab1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1932 Score = 26.2 bits (55), Expect = 4.1 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +1 Query: 214 SPILAMFKNAALKLNERQDRHERLVKLSR 300 S ++ F+ +L+L E+Q R E L+K R Sbjct: 1408 SSLVRRFEELSLQLQEKQKRDEELIKARR 1436 >SPAC3F10.02c |trk1|sptrk|potassium ion transporter Trk1|Schizosaccharomyces pombe|chr 1|||Manual Length = 841 Score = 25.8 bits (54), Expect = 5.5 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = +1 Query: 22 SITQSY*LYYFKNKVISL-IFIRIAFVR*YWFKMSGRGRQRSYRNRNQQ 165 SI Q + LY F + + + I+F+R YWF+ + R R R Q Sbjct: 74 SIWQQFILYGFTAITVPIWMHGSISFIRLYWFRRKFKDVVRQNRTRKFQ 122 >SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pombe|chr 3|||Manual Length = 1188 Score = 25.4 bits (53), Expect = 7.2 Identities = 10/20 (50%), Positives = 16/20 (80%) Frame = -3 Query: 144 TSLPSSS*HLEPVLADEGDS 85 T+ P +S ++EPVLAD+ D+ Sbjct: 1095 TNQPGASENVEPVLADDSDA 1114 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,060,938 Number of Sequences: 5004 Number of extensions: 34277 Number of successful extensions: 101 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 100 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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