Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_D15
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1144 - 9066832-9066935,9067968-9068169,9068265-9068414,906... 45 6e-05
01_06_1738 + 39570411-39571931 31 0.80
03_05_0040 + 20162923-20163255 31 1.1
04_03_0998 - 21555696-21556080,21556177-21556254,21556333-215564... 29 2.4
01_06_1110 - 34582267-34582468,34582732-34582819,34589337-345894... 29 4.3
06_03_1368 - 29612463-29612638,29613135-29613222,29613334-296134... 28 5.6
03_02_0943 + 12598616-12598789,12599790-12601250 28 5.6
01_06_1087 - 34430521-34430899,34432336-34432806,34432926-344331... 28 5.6
05_01_0012 - 70296-70398,70494-70648,70737-70843,71138-71216,713... 27 9.9
>01_01_1144 -
9066832-9066935,9067968-9068169,9068265-9068414,
9068553-9068637,9069264-9069343,9069972-9070070
Length = 239
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/70 (38%), Positives = 42/70 (60%)
Frame = +1
Query: 181 AREAAASLAPDSPILAMFKNAALKLNERQDRHERLVKLSRDITIXSKRIIFLLHSAITEE 360
A A ++ A S + A F A LN D+ ERLVK SRD+T+ SK+ IF +H I++
Sbjct: 6 AATAHSASAGCSAMKAEFAKHAEYLNTLNDKRERLVKASRDLTMNSKKAIFQVH-RISKN 64
Query: 361 STAKVIEEAK 390
+ +V+ +A+
Sbjct: 65 NKEEVLSKAE 74
>01_06_1738 + 39570411-39571931
Length = 506
Score = 31.1 bits (67), Expect = 0.80
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Frame = +1
Query: 181 AREAAASL--APDSPILAMFKNAALKLNERQDRHERLVKLSRDITIXSKRI---IFLLHS 345
A +A ASL A DSP+ A F N L R RHE V+ ++T + R+ ++ +
Sbjct: 176 ASDALASLRRAADSPLPAEFYNIILHALARLRRHEDTVRFYGEMT-STHRVHPDVYTFNI 234
Query: 346 AITEESTAKVIEEAKERFQKLIKGPIKSVGL 438
I A+ ++ A FQ++ + G+
Sbjct: 235 LINSSCRAEGVDAAMRWFQEMRRWSCSPTGV 265
>03_05_0040 + 20162923-20163255
Length = 110
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -1
Query: 635 NTIVITVLFLSLSASGMLKTNSXRISG-QLISFLVSIRENKVLASMYSWK 489
+TIV T+L LS SG++ S QL++ +VSI + L SM SW+
Sbjct: 30 STIVSTILVARLSVSGIVLVLLLPPSAVQLVAEIVSILIGRRLMSMSSWR 79
>04_03_0998 - 21555696-21556080,21556177-21556254,21556333-21556424,
21556524-21556620,21557113-21557141,21557620-21557781,
21557981-21558061,21558156-21558314,21558394-21558510,
21558598-21558666,21558753-21558831,21560884-21561050,
21561109-21561229,21561522-21561649,21562293-21562361,
21562408-21562539,21562619-21562991,21563274-21563398,
21563500-21563655,21563785-21564198,21564634-21564691,
21566522-21566648,21568047-21568305,21569005-21569104,
21569231-21569317,21569454-21569692,21569914-21569999,
21570409-21570532,21571111-21574332
Length = 2444
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = -1
Query: 377 ITFAVDSSVIAECNKKIILLLSIV 306
++ A D +++AECN K+++ LSI+
Sbjct: 1176 VSTAADIAILAECNMKLVIALSIM 1199
>01_06_1110 -
34582267-34582468,34582732-34582819,34589337-34589439,
34589886-34589914,34590114-34590144,34590621-34590822,
34591424-34591539,34591784-34592006,34592151-34592238,
34592336-34592407,34592485-34592560,34593822-34593880,
34595341-34595404,34595487-34595618
Length = 494
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 403 KLIKGPIKSVGLELENSPAYLHSRAVTAGFQEYIEARTLFSLMETKKLI 549
+LIKG I +G+ S AY++ R + G ++Y+ R++ S +K++
Sbjct: 308 ELIKGAIDFIGINHYYS-AYVNYRPLVEGVRDYVADRSMGSFTIIEKIL 355
>06_03_1368 -
29612463-29612638,29613135-29613222,29613334-29613474,
29613561-29613595,29613990-29614054,29614286-29614335,
29614417-29614521,29614608-29614688,29614771-29614852,
29614941-29614995,29615111-29616164,29617202-29617289,
29617379-29617485,29617568-29617686,29617784-29617994
Length = 818
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 211 DSPILAMFKNAALKLNERQDRHERLVKLSRDITIXSKRIIFLLHSAITEESTAKVIE 381
D P+L NAA +NE + V S ++ KR I HS IT + + V++
Sbjct: 328 DGPMLQDTTNAAPNINEVGMEESQQVLTSNELEDDGKRNILPEHSDITIQPSESVLD 384
>03_02_0943 + 12598616-12598789,12599790-12601250
Length = 544
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 268 DRHERLVKLSRDITIXSKRIIFLLHSAITEESTAKVIEEAKERFQK 405
D E+ +L D+ I K + +L EST K+I + K+R QK
Sbjct: 69 DIKEQAAQLEHDLIIKEKETLDVLKEL---ESTKKIIADLKQRIQK 111
>01_06_1087 -
34430521-34430899,34432336-34432806,34432926-34433112,
34433470-34433599,34433794-34434125,34434566-34435050,
34435185-34435752,34436579-34436640,34437569-34437636
Length = 893
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Frame = +1
Query: 337 LHSAITEESTAKVIEEAKERFQKLIKGPIKSVGLELENSPAYLHSRAVTAGFQEYI--EA 510
LH + T + ++ A K + I GL +PA+ H V AG Y+ E
Sbjct: 553 LHESCTPPIVHRDVKTANILLDKNLVAMISDFGLSRSYTPAHTHISTVAAGTVGYLDPEY 612
Query: 511 RTLFSLMETKKLISWPEIRXEFVFSIPEAESDKK 612
F L + S+ + E + P D +
Sbjct: 613 HATFHLTVKADVYSFGIVLLEIITGQPSVLVDSE 646
>05_01_0012 -
70296-70398,70494-70648,70737-70843,71138-71216,
71343-71423,71556-72581
Length = 516
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = -1
Query: 533 SIRENKVLASMYSWKPAVTARECKYAG 453
+++E+ +A++ SW P V ++C+ AG
Sbjct: 370 AVKESLRMATIVSWFPRVALKDCQVAG 396
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,309,911
Number of Sequences: 37544
Number of extensions: 194288
Number of successful extensions: 536
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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