Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_D15
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 28 5.0
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 28 5.0
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 28 5.0
AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic ... 28 5.0
Z83116-1|CAB05559.2| 480|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81109-16|CAB03252.2| 221|Caenorhabditis elegans Hypothetical p... 27 8.8
Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical pr... 27 8.8
AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion transpo... 27 8.8
AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical ... 27 8.8
AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical ... 27 8.8
AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical ... 27 8.8
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 253 LNERQDRHERLVKLSRDITIXSKRIIFLLHSAITEESTAKVIEEAK 390
L ER+ E +++L D+TI + I L T EST K +E K
Sbjct: 432 LVERKTAEEAVLQLEADMTIKNSSIKNLQVELATLESTVKQLERQK 477
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 253 LNERQDRHERLVKLSRDITIXSKRIIFLLHSAITEESTAKVIEEAK 390
L ER+ E +++L D+TI + I L T EST K +E K
Sbjct: 432 LVERKTAEEAVLQLEADMTIKNSSIKNLQVELATLESTVKQLERQK 477
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 253 LNERQDRHERLVKLSRDITIXSKRIIFLLHSAITEESTAKVIEEAK 390
L ER+ E +++L D+TI + I L T EST K +E K
Sbjct: 477 LVERKTAEEAVLQLEADMTIKNSSIKNLQVELATLESTVKQLERQK 522
>AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform d protein.
Length = 1044
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = -1
Query: 599 SASGMLKTNSXRISGQLISFLVSIRENKVLASMYSWKPAVTARECKYAGLFSSSKPTDLI 420
SA G L R QL + ++S S+KP+++A E + +PT I
Sbjct: 872 SAVGRLVNQQMRFMSQLTYNPDGCNSYQPMSSNQSYKPSISAEESSHTSNAQVQQPTRAI 931
Query: 419 GPFI 408
P +
Sbjct: 932 PPHV 935
>Z83116-1|CAB05559.2| 480|Caenorhabditis elegans Hypothetical
protein M01B2.1 protein.
Length = 480
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 64 VISLIFIRIAFVR*YWFKMSGRGRQRSYRNRNQQTLSTVAREAAASLAPDSPIL 225
V+S+IF+ I F+R + + + R Y +N + + +++SL D I+
Sbjct: 41 VLSIIFVTICFLRRIYRSSATKNGNRRYLVQNTYVKAQLDTNSSSSLPVDKEII 94
>Z81109-16|CAB03252.2| 221|Caenorhabditis elegans Hypothetical
protein R10D12.9 protein.
Length = 221
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 635 NTIVITVLFLSLSASGMLKTNSXRISGQLISFLVSIR 525
NT+ +T L +SA ++N + GQLIS ++ ++
Sbjct: 68 NTVNLTALSFYISAYAYYQSNRKNLIGQLISAVIIVK 104
>Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical
protein F52D10.1 protein.
Length = 737
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +1
Query: 145 YRNRNQQTLSTVAREAAASLAPDSPI----LAMFKNAALKLNERQDRHERL 285
+RN N + T+ + L+ P LA+FKNA +++R R RL
Sbjct: 37 HRNMNHSHIHTILLSLFSDLSSRFPQEKFDLALFKNAVFSVSDRDSRAPRL 87
>AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion
transporter ABTS-2 protein.
Length = 737
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +1
Query: 145 YRNRNQQTLSTVAREAAASLAPDSPI----LAMFKNAALKLNERQDRHERL 285
+RN N + T+ + L+ P LA+FKNA +++R R RL
Sbjct: 37 HRNMNHSHIHTILLSLFSDLSSRFPQEKFDLALFKNAVFSVSDRDSRAPRL 87
>AL023835-4|CAD56254.1| 564|Caenorhabditis elegans Hypothetical
protein Y37A1B.2d protein.
Length = 564
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 343 SAITEESTAKVIEEAKERFQKLIKGPIK 426
S T E +V++E FQK+ GP+K
Sbjct: 381 SVKTSEEAMRVMQERMNMFQKVFAGPVK 408
>AL023835-3|CAD56253.1| 566|Caenorhabditis elegans Hypothetical
protein Y37A1B.2c protein.
Length = 566
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 343 SAITEESTAKVIEEAKERFQKLIKGPIK 426
S T E +V++E FQK+ GP+K
Sbjct: 383 SVKTSEEAMRVMQERMNMFQKVFAGPVK 410
>AL023835-2|CAA19487.2| 592|Caenorhabditis elegans Hypothetical
protein Y37A1B.2b protein.
Length = 592
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 343 SAITEESTAKVIEEAKERFQKLIKGPIK 426
S T E +V++E FQK+ GP+K
Sbjct: 409 SVKTSEEAMRVMQERMNMFQKVFAGPVK 436
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,211,050
Number of Sequences: 27780
Number of extensions: 183809
Number of successful extensions: 521
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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