BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_D12 (527 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z66515-4|CAA91350.1| 153|Caenorhabditis elegans Hypothetical pr... 66 2e-11 Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 2.7 Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 2.7 AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical ... 28 3.6 >Z66515-4|CAA91350.1| 153|Caenorhabditis elegans Hypothetical protein R53.4 protein. Length = 153 Score = 65.7 bits (153), Expect = 2e-11 Identities = 29/61 (47%), Positives = 37/61 (60%) Frame = +2 Query: 119 RQYNPAVHGPYDPARYYGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHK 298 +++N VHGPY RYYGK DT F +KL ++ +W RR KTPSA F R WR + Sbjct: 51 KRWNKNVHGPYCHWRYYGKLDTKFMDVKLGDLPAWMARREKTPSAFYNEFMRNIWRVHNL 110 Query: 299 Y 301 Y Sbjct: 111 Y 111 >Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical protein F39B1.1 protein. Length = 1607 Score = 28.7 bits (61), Expect = 2.7 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +2 Query: 167 YGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQPKKVGMAPFYQ 340 + PD P Q K+N+I + S PS+ +G+ + + ++ Y +P + G P Q Sbjct: 34 FESPDEPARQRKINQIKQLYEANSPGPSSYSGSLATSPIDFRPVYNEP-RAGPIPHSQ 90 >Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical protein F39B1.1 protein. Length = 1607 Score = 28.7 bits (61), Expect = 2.7 Identities = 16/58 (27%), Positives = 29/58 (50%) Frame = +2 Query: 167 YGKPDTPFSQLKLNEIGSWFGRRSKTPSAVAGAFSRAWWRWQHKYVQPKKVGMAPFYQ 340 + PD P Q K+N+I + S PS+ +G+ + + ++ Y +P + G P Q Sbjct: 34 FESPDEPARQRKINQIKQLYEANSPGPSSYSGSLATSPIDFRPVYNEP-RAGPIPHSQ 90 >AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical protein C48E7.8 protein. Length = 820 Score = 28.3 bits (60), Expect = 3.6 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = +3 Query: 45 GTYSN*FLEKCIGLF*KYGFR*LPQGSIILLYMGLTILH 161 G+ SN + KC+ L R LP S+ LL+MGL H Sbjct: 407 GSSSNFSIIKCLALLGHRCLRLLPALSLYLLFMGLVYNH 445 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,542,466 Number of Sequences: 27780 Number of extensions: 236694 Number of successful extensions: 605 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 572 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 605 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1038911524 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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