Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_D11
         (411 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2AEK7 Cluster: Cell wall hydrolase/autolysin precursor...    34   0.98 
UniRef50_Q9VM97 Cluster: CG11326-PA, isoform A; n=8; Diptera|Rep...    31   9.1  

>UniRef50_Q2AEK7 Cluster: Cell wall hydrolase/autolysin precursor;
           n=1; Halothermothrix orenii H 168|Rep: Cell wall
           hydrolase/autolysin precursor - Halothermothrix orenii H
           168
          Length = 746

 Score = 34.3 bits (75), Expect = 0.98
 Identities = 20/53 (37%), Positives = 23/53 (43%)
 Frame = +2

Query: 161 RYCNSCFAGKECTEQVQSGIRNSQASIKFYSXASYENLXVKWSAPKKCPTLXL 319
           R  N  F GK+ T+     I   Q  IK  S A Y    VKW  P K  T+ L
Sbjct: 27  REVNIVFNGKDVTQDFNPIIYGGQLLIKSRSLAEYTGSTVKWYKPIKTLTMSL 79


>UniRef50_Q9VM97 Cluster: CG11326-PA, isoform A; n=8; Diptera|Rep:
           CG11326-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 1060

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +3

Query: 39  YRTGVCIKVHECHTRRCLCPYH*YCIN 119
           YR   C+ V EC T    CP H  CIN
Sbjct: 470 YRRQTCLDVDECRTGFFRCPEHSTCIN 496


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,861,183
Number of Sequences: 1657284
Number of extensions: 6412406
Number of successful extensions: 11609
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11606
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)