BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_D11 (411 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF305875-1|AAK55517.1| 1060|Drosophila melanogaster putative thr... 31 0.59 AE014134-1143|AAF52425.2| 1060|Drosophila melanogaster CG11326-P... 31 0.59 AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch dep... 28 5.5 AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA p... 28 5.5 >AF305875-1|AAK55517.1| 1060|Drosophila melanogaster putative thrombospondin protein. Length = 1060 Score = 31.1 bits (67), Expect = 0.59 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = +3 Query: 39 YRTGVCIKVHECHTRRCLCPYH*YCIN 119 YR C+ V EC T CP H CIN Sbjct: 470 YRRQTCLDVDECRTGFFRCPEHSTCIN 496 >AE014134-1143|AAF52425.2| 1060|Drosophila melanogaster CG11326-PA, isoform A protein. Length = 1060 Score = 31.1 bits (67), Expect = 0.59 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = +3 Query: 39 YRTGVCIKVHECHTRRCLCPYH*YCIN 119 YR C+ V EC T CP H CIN Sbjct: 470 YRRQTCLDVDECRTGFFRCPEHSTCIN 496 >AJ277789-1|CAB93525.1| 1738|Drosophila melanogaster mismatch depedent uracil/thymineDNA glycosylase protein. Length = 1738 Score = 27.9 bits (59), Expect = 5.5 Identities = 23/84 (27%), Positives = 35/84 (41%) Frame = +3 Query: 156 SVATVTRALLGKNVLNKCKVVSATAKHP*SFIAQHHTRTSX*SGPLQKNVRPFX*PPKGL 335 ++ TV + G N LN +SA++ HP I+ H S S Q + PP Sbjct: 1157 NIMTVKQLQHGNNNLNTTAGLSASSMHP---ISMEHIAASPQSSH-QMPPSLYNTPPPSH 1212 Query: 336 NVYXNXVCPTPKXSMNLNPKQICG 407 +Y P ++N N Q+ G Sbjct: 1213 LLYTASASPMASPALNCNYTQVHG 1236 >AE014135-90|AAF59338.1| 1738|Drosophila melanogaster CG1981-PA protein. Length = 1738 Score = 27.9 bits (59), Expect = 5.5 Identities = 23/84 (27%), Positives = 35/84 (41%) Frame = +3 Query: 156 SVATVTRALLGKNVLNKCKVVSATAKHP*SFIAQHHTRTSX*SGPLQKNVRPFX*PPKGL 335 ++ TV + G N LN +SA++ HP I+ H S S Q + PP Sbjct: 1157 NIMTVKQLQHGNNNLNTTAGLSASSMHP---ISMEHIAASPQSSH-QMPPSLYNTPPPSH 1212 Query: 336 NVYXNXVCPTPKXSMNLNPKQICG 407 +Y P ++N N Q+ G Sbjct: 1213 LLYTASASPMASPALNCNYTQVHG 1236 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,291,103 Number of Sequences: 53049 Number of extensions: 308723 Number of successful extensions: 635 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 597 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 634 length of database: 24,988,368 effective HSP length: 78 effective length of database: 20,850,546 effective search space used: 1209331668 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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