Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_D06
         (493 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   2.6  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   4.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   4.6  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   8.0  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 92  GTCPGRWRACLCRCSFLXEGTSI 24
           GTC    +  +CRC    EGT++
Sbjct: 157 GTCQDLGKTFMCRCPPDWEGTTL 179


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = +3

Query: 294 WNTQHRRTEVAQAINDSLKKLGLDYIDIYLMHWPI 398
           +N   R+  + + I     +    Y+ IY+ H P+
Sbjct: 42  YNLVIRKEHIFERIRTIYNQFSTPYVGIYIFHQPV 76


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 426 PNDYNRHLI 400
           PN YNRHL+
Sbjct: 509 PNTYNRHLV 517


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 325 ATSVLRCWVFHSL 287
           AT++LR W+F  L
Sbjct: 189 ATNILRAWLFQHL 201


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 325 ATSVLRCWVFHSL 287
           AT++LR W+F  L
Sbjct: 345 ATNILRAWLFQHL 357


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +3

Query: 375 IYLMHWPIGLNADYSHSDVDFMETWRGLE 461
           +YL H   G   DY H  +     +R L+
Sbjct: 331 LYLKHEQQGAAPDYRHWQIPLGRRFRALK 359


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,552
Number of Sequences: 336
Number of extensions: 2289
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)