BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_D06 (493 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 69 5e-13 SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 64 1e-11 SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 63 3e-11 SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 51 1e-07 SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 41 9e-05 SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 38 0.001 SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 36 0.003 SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 30 0.16 SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 29 0.29 SPBC14C8.16c |bot1||mitochondrial ribosomal protein subunit S35 ... 28 0.88 SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 0.88 SPCC1494.01 ||SPCC965.15|iron/ascorbate oxidoreductase family|Sc... 27 1.5 SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 26 2.7 SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synth... 25 6.2 SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 25 8.2 SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 8.2 SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 8.2 >SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism |Schizosaccharomyces pombe|chr 2|||Manual Length = 325 Score = 68.5 bits (160), Expect = 5e-13 Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 11/107 (10%) Frame = +3 Query: 201 FXTEQEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDIY 380 + E+EIGE ++ E V R DI++T+KLW HR V A+ +L+ L L+YID Y Sbjct: 59 YGNEKEIGEGIR----ESGVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAY 114 Query: 381 LMHWPIGL-----------NADYSHSDVDFMETWRGLEDAQRMGIVK 488 L+HWP L + + DV ETW+ +E+ G V+ Sbjct: 115 LIHWPFALLSGPEELPRNEKGELIYEDVPIEETWQAMEELLETGKVR 161 Score = 34.3 bits (75), Expect = 0.010 Identities = 18/52 (34%), Positives = 28/52 (53%) Frame = +2 Query: 53 NGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFXTASVFXN 208 NG +P+IGLGT+ +S + ++ V A+ GYRH TA ++ N Sbjct: 19 NGDKIPSIGLGTW---------RSGKDETKNAVCAALKAGYRHIDTAHIYGN 61 >SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces pombe|chr 1|||Manual Length = 321 Score = 64.1 bits (149), Expect = 1e-11 Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 11/107 (10%) Frame = +3 Query: 201 FXTEQEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDIY 380 + E E+G+ +K E V R+DI++T+KLW H V +A+ +LK L LDY+D Y Sbjct: 60 YGNEDEVGDGIK----ESGVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEY 115 Query: 381 LMHWPIGLNA--DYSHSDVD---------FMETWRGLEDAQRMGIVK 488 L+HWP+ D D D ETW+ +E G V+ Sbjct: 116 LIHWPVSFKTGEDKFPKDKDGNLIYEKNPIEETWKAMEKLLETGKVR 162 Score = 33.1 bits (72), Expect = 0.023 Identities = 16/52 (30%), Positives = 28/52 (53%) Frame = +2 Query: 53 NGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFXTASVFXN 208 +G +P +GLGT+ +S+ Q ++ V A+ GYRH A+++ N Sbjct: 20 DGSKIPGLGLGTW---------RSEPNQTKNAVKTALQYGYRHIDAAAIYGN 62 >SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reductase AKR3C2|Schizosaccharomyces pombe|chr 1|||Manual Length = 284 Score = 62.9 bits (146), Expect = 3e-11 Identities = 34/95 (35%), Positives = 54/95 (56%) Frame = +3 Query: 201 FXTEQEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDIY 380 + E+E+G A+K E V R +FIT+K+ H + +A+N+SL+KLG DY+D+Y Sbjct: 54 YGNEEEVGVALK----EANVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDLY 106 Query: 381 LMHWPIGLNADYSHSDVDFMETWRGLEDAQRMGIV 485 L+H PI + + E W+ +E A G+V Sbjct: 107 LLHSPI----PFYEKKIPISEGWKAMETALGTGLV 137 >SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces pombe|chr 1|||Manual Length = 275 Score = 50.8 bits (116), Expect = 1e-07 Identities = 31/93 (33%), Positives = 51/93 (54%) Frame = +3 Query: 201 FXTEQEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDIY 380 + E + G A+ +EE KREDI+ T+KL + ++ ++ +I+ S+K GL YID++ Sbjct: 50 YHNEADCGRAILKFMEETGTKREDIWFTSKLNDLSGYKSTLS-SIDASVKACGLGYIDLF 108 Query: 381 LMHWPIGLNADYSHSDVDFMETWRGLEDAQRMG 479 L+H P G D +E+W+ LE G Sbjct: 109 LLHSPYG----------DRIESWKALEKGVEEG 131 Score = 29.1 bits (62), Expect = 0.38 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = +2 Query: 41 LKMNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFXTASVFXN 208 +K+NNG P G+Y+ V ++K D V A+ GYRH +A ++ N Sbjct: 6 VKLNNGLKCPQFAYGSYM------VNRTK---CFDSVYAALQCGYRHIDSAQMYHN 52 >SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces pombe|chr 1|||Manual Length = 283 Score = 41.1 bits (92), Expect = 9e-05 Identities = 27/67 (40%), Positives = 37/67 (55%) Frame = +3 Query: 201 FXTEQEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDIY 380 + E G+A+ E+ VKR DIF+T+KL N + A AI SL LG YID++ Sbjct: 55 YGNEDICGKAIVDWCEKNNVKRTDIFLTSKLANCSDYYSTRA-AIRSSLHHLG-TYIDLF 112 Query: 381 LMHWPIG 401 L+ P G Sbjct: 113 LIQSPAG 119 Score = 32.7 bits (71), Expect = 0.031 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +2 Query: 47 MNNGRDMPAIGLGTYLGFDQNGVVKSKDKQLRDVVMRAIDVGYRHFXTASVFXN 208 + NG +P IG G ++ K + +V +A+D GYRH TA+V+ N Sbjct: 13 LTNGMVIPRIGFGAFM---------LKYNECYGLVTQALDSGYRHIDTAAVYGN 57 >SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces pombe|chr 2|||Manual Length = 276 Score = 37.5 bits (83), Expect = 0.001 Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 4/70 (5%) Frame = +3 Query: 201 FXTEQEIGEAVKMKVEEGV-VKREDIFITTKLWNTQHRRTEVAQAINDSLKKLGLDYIDI 377 + E+E +A++ + V +KREDI + TK+ ++ +A+ SL++ G +D+ Sbjct: 47 YRNEKECEQAIQDFCHQNVNIKREDITLITKIPDSLQGFERTWKAVEQSLRRTGRPKLDV 106 Query: 378 YLMH---WPI 398 L+H WP+ Sbjct: 107 VLIHSPKWPV 116 >SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pombe|chr 3|||Manual Length = 344 Score = 35.9 bits (79), Expect = 0.003 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = +3 Query: 285 TKLWNTQH-RRTEVAQAINDSLKKLGLDYIDIYLMHWP 395 TKL NT R + + +N SLK+LGL Y+D+ + H P Sbjct: 102 TKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAHRP 139 >SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizosaccharomyces pombe|chr 1|||Manual Length = 340 Score = 30.3 bits (65), Expect = 0.16 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 10/53 (18%) Frame = +3 Query: 261 KREDIFITTKLWNTQHRRTE----------VAQAINDSLKKLGLDYIDIYLMH 389 +R++IF+ TK ++ T + +A++ SLK+LG+D ID+Y +H Sbjct: 74 RRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVH 126 >SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a Pol2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 2199 Score = 29.5 bits (63), Expect = 0.29 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -2 Query: 411 RHLIQWASASNKYLYNPDLVSSV 343 +HL +W S+S YLY+P L S V Sbjct: 1780 QHLARWISSSKSYLYSPLLSSHV 1802 >SPBC14C8.16c |bot1||mitochondrial ribosomal protein subunit S35 |Schizosaccharomyces pombe|chr 2|||Manual Length = 315 Score = 27.9 bits (59), Expect = 0.88 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Frame = +3 Query: 195 PFFXTEQEIGEAVKMKVEEGVVKREDIFITTKLWNTQHRRTEV---AQAINDSLKK 353 PFF + I +++MK+ + ++ I + + +NT +R E + IND ++ Sbjct: 124 PFFKPPRPISHSLRMKITDEYLQGASIEVLARKFNTSPQRIEALIKLRRINDEFEE 179 >SPAC25A8.02 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 390 Score = 27.9 bits (59), Expect = 0.88 Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +3 Query: 285 TKLWNTQHRRTEVAQ-AINDSLKKLGLDYIDIYLMHW 392 +K + T +RR+E+ Q +++ KKL +D+Y +HW Sbjct: 125 SKEYLTAYRRSELLQNKLHEYQKKLITRVLDMYQLHW 161 >SPCC1494.01 ||SPCC965.15|iron/ascorbate oxidoreductase family|Schizosaccharomyces pombe|chr 3|||Manual Length = 321 Score = 27.1 bits (57), Expect = 1.5 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 4/33 (12%) Frame = +3 Query: 186 IPPPFFX----TEQEIGEAVKMKVEEGVVKRED 272 IPP FF +E+++ +K + EGV +RED Sbjct: 147 IPPDFFSKSHSSEEDVLRLLKYSIPEGVERRED 179 >SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces pombe|chr 1|||Manual Length = 874 Score = 26.2 bits (55), Expect = 2.7 Identities = 9/30 (30%), Positives = 19/30 (63%) Frame = +3 Query: 285 TKLWNTQHRRTEVAQAINDSLKKLGLDYID 374 TK+WN H+ E + ++D++++ L +D Sbjct: 680 TKIWNCVHQLLEREKKMSDAMRQTKLTIVD 709 >SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synthase Ade3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1323 Score = 25.0 bits (52), Expect = 6.2 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +2 Query: 17 RQRWKCPRLKMNNGRDMPAIGLGTYLGFDQN 109 R +C R +M N D GLG +L FD N Sbjct: 1017 RDNPECARQEMENIADNNDPGLGYHLTFDPN 1047 >SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces pombe|chr 1|||Manual Length = 630 Score = 24.6 bits (51), Expect = 8.2 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +2 Query: 335 KRFTEETRSGLYRYLFDALAHWIK 406 K T+E SG YRY FD W++ Sbjct: 587 KMITDEFESGSYRY-FDFEGDWVQ 609 >SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1628 Score = 24.6 bits (51), Expect = 8.2 Identities = 12/41 (29%), Positives = 21/41 (51%) Frame = -3 Query: 125 WTSLRRSDQTQGTCPGRWRACLCRCSFLXEGTSIVDASPSP 3 W L SD+ G G+++ L +F +G ++ A+P P Sbjct: 337 WAHLSPSDEELGKELGKYKDKLDEQTFKAKGNALTMAAPLP 377 >SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1236 Score = 24.6 bits (51), Expect = 8.2 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = -1 Query: 295 HSLVVIKISSLLTTPSSTFIFTASPISCSVXKNGGGXEMTVSDIYGAHYNIT 140 +S VI SS L + SS+ I ++SP++ S VS + NIT Sbjct: 666 YSSSVIPSSSTLVSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSASLSNIT 717 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,002,717 Number of Sequences: 5004 Number of extensions: 38611 Number of successful extensions: 123 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 117 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 121 length of database: 2,362,478 effective HSP length: 68 effective length of database: 2,022,206 effective search space used: 192109570 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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